SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for WP_010951785.1.28475 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_010951785.1.28475
Domain Number 1 Region: 80-405
Classification Level Classification E-value
Superfamily PLP-dependent transferases 8.36e-47
Family Cystathionine synthase-like 0.048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_010951785.1.28475
Sequence length 475
Comment MULTISPECIES: L-selenocysteinyl-tRNA(Sec) synthase [Pseudomonas]; AA=GCF_001319995.1; RF=na; TAX=1661693; STAX=1661693; NAME=Pseudomonas sp. GTC 16482; strain=GTC 16482; AL=Contig; RT=Major
Sequence
MSNSLASDTPRLPSIDTLLRHPACLPLIDRHGRDAVLNTLRQLLDDLREPARNGELGSAE
LAPEILLGRSGERLALQQRSQVRRVFNLTGTVLHTNLGRALLPDEAIEAMQTAARYPLNL
EFDLATGKRGDRDDLIEGLIRELTGAEAVTVVNNNAAAVLLALNSLGARKEGIISRGELI
EIGGAFRIPDIMARAGVKLHEVGTTNRTHARDYEAAIGPRTGLLMRVHCSNYSIQGFTTQ
VPTAELARIAHQHELPLLEDLGSGSLLDLTRWGLPAEPTVRQALADGADIVTFSGDKLLG
GPQAGIIVGHKDLITRIKKNPLKRALRVDKITLAALEAVLALYRNPDRLAERLPSLRLLT
RSQAEIQAQAERLAPELQARLGEQWAISVEPALGMIGSGSQPVARLPSAALCLRPQVSKK
LRGRSLHVLERALRDLPVPVLGRIDDDALWLDLRQLDDEAQWLAQLPALQLGPVQ
Download sequence
Identical sequences Q88QJ8
NP_742658.1.35174 WP_010951785.1.28295 WP_010951785.1.28475 WP_010951785.1.3142 WP_010951785.1.58218 WP_010951785.1.71439 WP_010951785.1.87606 160488.PP_0493 gi|26987233|ref|NP_742658.1|

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