SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for WP_011058925.1.42693 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  WP_011058925.1.42693
Domain Number - Region: 10-75
Classification Level Classification E-value
Superfamily SpoIIaa-like 0.034
Family Anti-sigma factor antagonist SpoIIaa 0.047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_011058925.1.42693
Sequence length 288
Comment phosphatidylserine decarboxylase proenzyme [Pseudomonas protegens]; AA=GCF_002208745.1; RF=na; TAX=380021; STAX=380021; NAME=Pseudomonas protegens; strain=FDAARGOS_307; AL=Complete Genome; RT=Major
Sequence
MKKRLFIISQYLLPHHLLSRLAGCIAECRVRWFKNAFTRWFAKQYQVDMSEAQVEDVTAY
EHFNAFFTRALKDGARPLDPTPGAVLSPADGAVSQLGPIEHGRVFQAKGHSYSVLELLGG
DPALAQPFMGGDFATIYLSPKDYHRVHMPLAGTLREMVYVPGRIFSVNQTTAENVPELFA
RNERVVCIFDTERGPMALVLVGAMIVASIETVWAGLVTPPKRELKTVRYDEAARAPIHLE
KGAEMGRFKLGSTAIVLFGPDQVQWAQELAAGSPVRMGQGLGLGLPKA
Download sequence
Identical sequences Q4KJ87
220664.PFL_0552 PlR35 gi|70734056|ref|YP_257696.1| WP_011058925.1.14038 WP_011058925.1.18072 WP_011058925.1.42693

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]