SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for WP_011080669.1.99976 from NCBI 2017_08 genome

Domain architecture

Domain assignment details

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Strong hits

Sequence:  WP_011080669.1.99976
Domain Number 1 Region: 60-228
Classification Level Classification E-value
Superfamily Pseudouridine synthase 4e-43
Family Pseudouridine synthase RsuA/RluD 0.00000177
Further Details:      
Domain Number 2 Region: 1-56
Classification Level Classification E-value
Superfamily Alpha-L RNA-binding motif 0.0000000000115
Family Pseudouridine synthase RsuA N-terminal domain 0.0059
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_011080669.1.99976
Sequence length 233
Comment MULTISPECIES: 16S rRNA pseudouridine(516) synthase [Vibrio]; AA=GCF_001653775.1; RF=na; TAX=672; STAX=672; NAME=Vibrio vulnificus; strain=FORC_016; AL=Complete Genome; RT=Major
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Identical sequences A0A1L9L860 A0A1V8MYP9 Q7MLK1 Q8D8X2
WP_011080669.1.17874 WP_011080669.1.33883 WP_011080669.1.34622 WP_011080669.1.39524 WP_011080669.1.53345 WP_011080669.1.54486 WP_011080669.1.58885 WP_011080669.1.73173 WP_011080669.1.82587 WP_011080669.1.94371 WP_011080669.1.99976 gi|27366125|ref|NP_761653.1| gi|37679610|ref|NP_934219.1| 196600.VV1426 216895.VV1_2843

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