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Domain assignment for WP_011149571.1.34622 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_011149571.1.34622
Domain Number 1 Region: 78-315
Classification Level Classification E-value
Superfamily Pseudouridine synthase 4.11e-80
Family Pseudouridine synthase RsuA/RluD 0.0000000106
Further Details:      
 
Domain Number 2 Region: 17-67
Classification Level Classification E-value
Superfamily Alpha-L RNA-binding motif 0.000000000106
Family YbcJ-like 0.08
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_011149571.1.34622
Sequence length 325
Comment 23S rRNA pseudouridine(1911/1915/1917) synthase [Vibrio vulnificus]; AA=GCF_000009745.1; RF=na; TAX=196600; STAX=672; NAME=Vibrio vulnificus YJ016; strain=YJ016; AL=Complete Genome; RT=Major
Sequence
MAQQIELTNTVKDSQLGQRLDQAIAELFADFSRSRLKEWLLDGKVTVDGNVVTKPRTKVM
GGEVITVLAELEDEVRWEAQDIPLDIVYEDDDILVINKPRDFVVHPGAGTPDGTVLNALL
FHCPEVAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVRALQKRHITREYEAIAIGRMT
AGGKVDKPIGRHATKRTLMAVSPMGKPAVTHFRVAEHFREHTRIRLRLETGRTHQIRVHM
SYLQHPLLGDAAYGGRARIPAGASEDVTAMIRNFDRQALHAVMLRFEHPITGEEMEFHAP
VPDDMVELTETLRRDAQEHGLPDEY
Download sequence
Identical sequences Q7MNK3
196600.VV0713 WP_011149571.1.34622 gi|37678897|ref|NP_933506.1|

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