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Domain assignment for WP_011149934.1.99976 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_011149934.1.99976
Domain Number 1 Region: 68-235
Classification Level Classification E-value
Superfamily Pseudouridine synthase 2.26e-42
Family Pseudouridine synthase RsuA/RluD 0.0013
Further Details:      
 
Domain Number 2 Region: 4-96
Classification Level Classification E-value
Superfamily Alpha-L RNA-binding motif 0.00000000000892
Family Ribosomal protein S4 0.041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_011149934.1.99976
Sequence length 320
Comment 23S rRNA pseudouridylate synthase B [Vibrio vulnificus]; AA=GCF_001653775.1; RF=na; TAX=672; STAX=672; NAME=Vibrio vulnificus; strain=FORC_016; AL=Complete Genome; RT=Major
Sequence
MNEKLQKVLARAGHGSRRELEALIKSGRVSVNGIVAKLGERLEDEQAVVRIDGHVVSVKA
QEEVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTT
DGELANRLMHPSRQVEREYLVRVFGEVNEHKVRNLVNGVELDDGLARFEDVVYTGGEGMN
HTFYVVINEGRNREVRRLWESQDCTVSRLKRVRYGDIYLDKKLPRGGWMELELKDVNYLR
ELVELRPEKETMIELNNSSRKRDRARSQKIRRAVKRHEERVSTPKGRSNNAARRKPSKAA
GQTSKTNSRNQAGSRSKPQR
Download sequence
Identical sequences A0A0H0Y3T8 A0A2J9Y262 Q7MM46
196600.VV1227 gi|37679411|ref|NP_934020.1| gi|320156837|ref|YP_004189216.1| WP_011149934.1.25536 WP_011149934.1.33883 WP_011149934.1.34622 WP_011149934.1.54486 WP_011149934.1.55006 WP_011149934.1.58885 WP_011149934.1.66581 WP_011149934.1.73066 WP_011149934.1.79678 WP_011149934.1.8379 WP_011149934.1.90288 WP_011149934.1.99976

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