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Domain assignment for WP_011230212.1.2219 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_011230212.1.2219
Domain Number 1 Region: 335-581
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 5.13e-72
Family Extended AAA-ATPase domain 0.00000143
Further Details:      
 
Domain Number 2 Region: 550-641
Classification Level Classification E-value
Superfamily Homeodomain-like 0.0000000000000108
Family FIS-like 0.034
Further Details:      
 
Domain Number 3 Region: 59-197
Classification Level Classification E-value
Superfamily GAF domain-like 0.00000000883
Family IclR ligand-binding domain-like 0.036
Further Details:      
 
Domain Number 4 Region: 210-265
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 0.0000138
Family PYP-like 0.08
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_011230212.1.2219
Sequence length 643
Comment sigma-54-dependent Fis family transcriptional regulator [Geobacillus kaustophilus]; AA=GCF_000009785.1; RF=na; TAX=235909; STAX=1462; NAME=Geobacillus kaustophilus HTA426; strain=HTA426; AL=Complete Genome; RT=Major
Sequence
MIVTREQVKSMWEKFVFHNELDPDLPPMIRDSWLRSKKAMVDPFRPYGWIKEIDNEKYRS
LIDWSLPLMEGLYSIVKGSGFLVILCNENGQLLLSIGDCEPLARAEEIGFIAGADWSEQV
MGTNAIGTSIVIDRPIQVFAEEHYTKICQSWTCSAAPIHDPDGRIIGVLNMSGPYEKVHS
HTLGMVVSAVKAIEYQLKLHENAEKNVMMQRFLEATTNNMKEGILIIDRDGKIVKANNQL
KKLFHIPQLQLEEKKLDDLFNDPSICSNHPLHLQNQELHLSVKPSNAVHHVLVDKIPIYE
KKERIGSMIIVKEIEKVRQFVNHLSGNQAKITFADMIGQHPCFIEKMNEARLAAATDSNV
LILGESGTGKEMVAQAIHNESKRRNKPFIAINCGGIPRDLLGSELFGYVDGAFTGAKKGG
SAGKFELANGGTLFLDEIGEMSLEMQVLLLRVIQEKEVMRIGGHKVIPVDVRIIAATNKD
LRREVQKGSFREDLFFRLNVMPIVLPPLRERKEDIPLLVRHFIERLAHKRDKPFPEIRSD
FLEALMQYDWPGNIRELQNMIERVLNQCTKPVLTAADLPEEIFRPLRLPQVRENVDISRN
EIKKQSIIEALKQCNGNISKAARYLGISRSTFYRQMDKWNIRY
Download sequence
Identical sequences Q5L236
WP_011230212.1.2219 gi|56419244|ref|YP_146562.1| 235909.GK0709

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