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Domain assignment for WP_011331923.1.2668 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_011331923.1.2668
Domain Number 1 Region: 92-298
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 1.23e-29
Family Phosphate binding protein-like 0.0064
Further Details:      
 
Domain Number 2 Region: 1-112
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 4.03e-20
Family LysR-like transcriptional regulators 0.0036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_011331923.1.2668
Sequence length 314
Comment LysR family transcriptional regulator [Pseudomonas fluorescens]; AA=GCF_000012445.1; RF=na; TAX=205922; STAX=294; NAME=Pseudomonas fluorescens Pf0-1; strain=Pf0-1; AL=Complete Genome; RT=Major
Sequence
MHIDLRQLRHFIALAEQRSFVAGAQAVNLSQSAFSRSIQALEHSVGCQLVDRGRKELPPT
KQGQVLLEHARRLVSGAQQMANEISQFNGLEAGELRFGCGPAPAAGLIPRAIGSFIGRYP
KARVHYQVDDWQSLSKRLLSEEFEFFVADTRHFEADPDYLTHRLRPRKWHFCCRAGHPLG
AFERVTAEQLMSYPLAVSIRPPNLRKVIVDLSGRPDFVPNVECENSASLLGVVLRSDAIG
IVGAYSDALHQARGELVCLKVEGLADDLEELYTRYGIVSRAGYRLSPLAEAMIEQIKAID
AVEEEVCSLANLAV
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Identical sequences Q3KJU7
205922.Pfl01_0215 gi|77456443|ref|YP_345948.1| WP_011331923.1.2668

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