SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for WP_011334113.1.54700 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_011334113.1.54700
Domain Number 1 Region: 4-210
Classification Level Classification E-value
Superfamily Transmembrane di-heme cytochromes 1.18e-51
Family Formate dehydrogenase N, cytochrome (gamma) subunit 0.00000268
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_011334113.1.54700
Sequence length 217
Comment MULTISPECIES: formate dehydrogenase subunit gamma [Pseudomonas]; AA=GCF_001655595.1; RF=na; TAX=1534110; STAX=1534110; NAME=Pseudomonas sp. DR 5-09; strain=DR 5-09; AL=Complete Genome; RT=Major
Sequence
MSNKTILRYTANQRTNHWLVAILFFMAGLSGLALFHPSMFWLTNLFGGGPWTRILHPFMG
VLMFVFFLGLVFRFWRSNFFIDNDWKWLRRIDRVMVNDEETVPAVGKYNAGQKLLFWTLL
LCMLGLLFTGLVIWRAYFSHYFGITTIRWAMLLHALAGFVLILSIIVHIYAGIWIKGSVD
AMMHGWVSRAWARKHHALWYREVESQDPPERPVTKKG
Download sequence
Identical sequences A0A173J2J7 Q3KCR4
205922.Pfl01_2700 WP_011334113.1.2668 WP_011334113.1.38776 WP_011334113.1.54700 WP_011334113.1.55771 WP_011334113.1.98588 gi|77458925|ref|YP_348431.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]