SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for WP_011334249.1.2668 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_011334249.1.2668
Domain Number 1 Region: 32-329
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 2.6e-72
Family Phosphate binding protein-like 0.000000000364
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_011334249.1.2668
Sequence length 337
Comment iron ABC transporter substrate-binding protein [Pseudomonas fluorescens]; AA=GCF_000012445.1; RF=na; TAX=205922; STAX=294; NAME=Pseudomonas fluorescens Pf0-1; strain=Pf0-1; AL=Complete Genome; RT=Major
Sequence
MSPSLPSFLKQAALATALLAAGQVFAADSVGLVVYNAQHETLTKAWVAGFTEETGIPVTV
RNGDDTEMGNQIVQEGAASPADVFLTENSPAMVLVDNAKLFAPVAPATLEQVDAAYRPAH
GQWVGIAARSTVFVYNPAKLPEKDLPKSLMDLATPAWKGRWAASPAGADFQAIVAAVLEQ
KGEAATLEWLKGMKANFTAYRGNSSVLKAVNAGQVDSGVIYHYYAFVDQAKTGENSKNTA
LHYFKHQDPGAFVSISGGGVLASSKHQEDAQKFLQYITGKQGQEVLRTGNSFEYAVGKDS
ASNPKLVPLKDLDAPKVDASKLDSKKAVELMTQAGLL
Download sequence
Identical sequences Q3KCC7
205922.Pfl01_2837 gi|77459062|ref|YP_348568.1| WP_011334249.1.2668

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]