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Domain assignment for WP_011335835.1.2668 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_011335835.1.2668
Domain Number 1 Region: 88-300
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 6.7e-49
Family Phosphate binding protein-like 0.0074
Further Details:      
 
Domain Number 2 Region: 8-112
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 1.14e-16
Family LysR-like transcriptional regulators 0.0064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_011335835.1.2668
Sequence length 301
Comment LysR family transcriptional regulator [Pseudomonas fluorescens]; AA=GCF_000012445.1; RF=na; TAX=205922; STAX=294; NAME=Pseudomonas fluorescens Pf0-1; strain=Pf0-1; AL=Complete Genome; RT=Major
Sequence
MDLFQSMSVYVKVVESGSMTAAALQCEMSTTMVGNHLRALEQRLGVQLLQRTTRRQRLTE
FGSVYYQRCLEVLGLVADSERLAEQTLDEPRGILRVTAPLTFGVERLAPALSEFSLQCPQ
VKLDVILTNRRPDLLESGLDVAFRLGHFDQSNLIARPLIDYTLTVCASPEYVARRGMPLT
PEELRQHDCLSFAYPAGDDWQSVEKQWRLSGPDGEIMVDVKGPMLINSSAGLHQAARTGM
GIVMLPDALVEQDLRDGRLVVVMPDYQPPNRPMHLLYAPDRYRLPKLRRFVEFALQMWGR
P
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Identical sequences Q3K780
gi|77460858|ref|YP_350365.1| 205922.Pfl01_4637 WP_011335835.1.2668

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