SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for WP_011378346.1.5740 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_011378346.1.5740
Domain Number 1 Region: 22-381
Classification Level Classification E-value
Superfamily PLP-dependent transferases 2.42e-106
Family Cystathionine synthase-like 0.000000000166
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_011378346.1.5740
Sequence length 384
Comment MULTISPECIES: alanine--glyoxylate aminotransferase [Synechococcus]; AA=GCF_000010065.1; RF=representative genome; TAX=269084; STAX=32046; NAME=Synechococcus elongatus PCC 6301; strain=PCC 6301; AL=Complete Genome; RT=Major
Sequence
MTVTLPSVSEKHRVRLQPLELPERLLLGPGPSNAHPAVLEAISRPPIGHLDPKFLELMTE
VQGLLRYIWQTDNRLTIPVSGTGSAAMEATIANSVEPGDVVLVGVMGYFGNRLVDMAGRY
GADVRTIHKPWGDVFSLAELRQALEEHRPQILALVHAETSTGAEQPLAGVGDLCREFDCL
LLIDTVTSLGAVPTLLDEWGVDLAYSCSQKGLSCPPGVSPFTMGPRAEEKLARRKGKVAN
WYLDMSLLNQYWGSDRVYHHTAPVNMNFGIREALRLIADEGIETVWKRHRDNAEYLWAGL
EDLGLTCHVPVENRLPTLTTVRIPEGVDGKAVSRQLLDEHGIEMGGGLGELAGKVWRIGL
MGYNSRRENVDRLLSILADVLPRS
Download sequence
Identical sequences Q31L79
1140.Synpcc7942_2160 gi|81300969|ref|YP_401177.1| WP_011378346.1.45845 WP_011378346.1.5740 WP_011378346.1.95485

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]