SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for WP_011600700.1.40725 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_011600700.1.40725
Domain Number 1 Region: 13-108
Classification Level Classification E-value
Superfamily Enzyme IIa from lactose specific PTS, IIa-lac 3.14e-26
Family Enzyme IIa from lactose specific PTS, IIa-lac 0.00062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_011600700.1.40725
Sequence length 115
Comment PTS chitobiose transporter subunit IIA [Borreliella afzelii]; AA=GCF_001900865.1; RF=na; TAX=29518; STAX=29518; NAME=Borreliella afzelii; strain=BO23; AL=Chromosome; RT=Major
Sequence
MNKKIYSIEELVDKISMPVVAYSGEAKSFLREALEYAKNKDYEKAALTIQESKNSIAKAH
EAHREIIQQSATNPNSVKTPFILIHAEDHLMSAISELSIFEELINVYKIINEIKK
Download sequence
Identical sequences Q0SL50
gi|111074123|ref|YP_709251.1| gi|111074123|ref|YP_709251.1|NC_008274 gi|216997238|ref|YP_002333783.1|NC_011650 gi|384206197|ref|YP_005591972.1|NC_017229 WP_011600700.1.101990 WP_011600700.1.4002 WP_011600700.1.40725 WP_011600700.1.72423 WP_011600700.1.79404 WP_011600700.1.94617 gi|111074123|ref|YP_709251.1| 390236.BAPKO_5004

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