SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for WP_011970672.1.29075 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_011970672.1.29075
Domain Number 1 Region: 481-586
Classification Level Classification E-value
Superfamily 2Fe-2S ferredoxin-like 1.18e-27
Family 2Fe-2S ferredoxin domains from multidomain proteins 0.0076
Further Details:      
 
Domain Number 2 Region: 276-370
Classification Level Classification E-value
Superfamily Riboflavin synthase domain-like 6.62e-25
Family Ferredoxin reductase FAD-binding domain-like 0.00079
Further Details:      
 
Domain Number 3 Region: 7-115
Classification Level Classification E-value
Superfamily ISP domain 1.13e-24
Family Ring hydroxylating alpha subunit ISP domain 0.0094
Further Details:      
 
Domain Number 4 Region: 377-491
Classification Level Classification E-value
Superfamily Ferredoxin reductase-like, C-terminal NADP-linked domain 3.27e-24
Family Aromatic dioxygenase reductase-like 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_011970672.1.29075
Sequence length 588
Comment ferredoxin [Sinorhizobium medicae]; AA=GCF_000419665.1; RF=na; TAX=1041148; STAX=110321; NAME=Sinorhizobium medicae DI28; strain=DI28; AL=Contig; RT=Major
Sequence
MLDTAKTRWHPIAASYDLPFRHVFHAQLLGREFAVWRADDGYVNIWENRCLHRGVRLSIG
INDGRELKCQYHGWRYSNRTAGCTYIPAHPADAPARTITNRTFAGVERYGLVWSAEEPHG
RVPDVAGLREGEQLALRGIPLNAPADAVVSALTGYRFQPNGRLQGNTANVSLEGSDTFSV
ALRAYEEGAETLVVFFVQPVDSSRSVIRGVLDAGPQGAERLAILRHHNERLSKLREIAER
EAQAAPQPAPLEPVIERVSPELAEMPEMTAHGRKATIRVTVARKWLAADGIAAFELRPVQ
GLLPTFQPGAHIDVHMPNGLVRQYSITNGPGESDSYVIGVKLERDSMGGSLCMHETVREG
DLLAISEPRNNFPLRRDAVRTIFVAGGIGVTPLLAMAQALKNQNLDYEFHYFAQNQEQLA
FPEKTALLGEALKPHLGFLPETTAAKLKEILSGYRPDMHVYLCGPGPMLEAARRIAADLG
WPETAVHFEYFKNTNTIDDSSSFEVALARSCVTLQVTAGKTILETMREAGIDMPSSCEQG
ACGTCLATVIEGEPDHQDVYLNDAERKSGTKIMTCVSRARSARLVLDL
Download sequence
Identical sequences A6ULN4
366394.Smed_5870 gi|150377902|ref|YP_001314497.1| WP_011970672.1.29075 YP_001314497.1.44884 gi|150377902|ref|YP_001314497.1|NC_009621

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