SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for WP_011975161.1.61285 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_011975161.1.61285
Domain Number 1 Region: 4-112
Classification Level Classification E-value
Superfamily N-utilization substance G protein NusG, N-terminal domain 5.89e-38
Family N-utilization substance G protein NusG, N-terminal domain 0.00013
Further Details:      
 
Domain Number 2 Region: 120-176
Classification Level Classification E-value
Superfamily Translation proteins SH3-like domain 1.35e-18
Family N-utilization substance G protein NusG, C-terminal domain 0.0013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_011975161.1.61285
Sequence length 176
Comment MULTISPECIES: transcription termination/antitermination protein NusG [Sinorhizobium]; AA=GCF_000419785.1; RF=na; TAX=1041150; STAX=110321; NAME=Sinorhizobium medicae WSM244; strain=WSM244; AL=Contig; RT=Major
Sequence
MAARWYIVHAYSNFEKKVAESIEEKARQKGLTHLFEKILVPTEKVVEIRRGRKVDAERKF
FPGYVLVRADLTDEAYHLIKNTPKVTGFLGTDSKPVPIPDHEADRILGQVQDGVERPKPS
ISFEIGEQVRVSDGPFASFNGIVQDVDEERSRLKVEVSIFGRATPVELEYGQVEKV
Download sequence
Identical sequences A6U846
gi|150396194|ref|YP_001326661.1| WP_011975161.1.29075 WP_011975161.1.31871 WP_011975161.1.61285 WP_011975161.1.7720 WP_011975161.1.89664 YP_001326661.1.44884 366394.Smed_0973

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