SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for WP_012157676.1.9268 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_012157676.1.9268
Domain Number 1 Region: 68-149
Classification Level Classification E-value
Superfamily Coiled-coil domain of nucleotide exchange factor GrpE 6.15e-16
Family Coiled-coil domain of nucleotide exchange factor GrpE 0.0031
Further Details:      
 
Domain Number 2 Region: 152-208
Classification Level Classification E-value
Superfamily Head domain of nucleotide exchange factor GrpE 0.0000000000000484
Family Head domain of nucleotide exchange factor GrpE 0.0043
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_012157676.1.9268
Sequence length 278
Comment nucleotide exchange factor GrpE [Frankia sp. EAN1pec]; AA=GCF_000018005.1; RF=na; TAX=298653; STAX=298653; NAME=Frankia sp. EAN1pec; strain=EAN1.pec; AL=Complete Genome; RT=Major
Sequence
MTSAHGEHRLDDSRAGGDGGPEEPIVKDRRRIDPETGQVRGSAAGAATPGAEPMGPAGAG
PADSDSELVASLRGQLGERTADLQRLKAEFDNYRRRAARERDAAGDQAVSKLLGGLLGVL
DDIGRARDHGDLEGPFKAIAESLETALESTGLERFGTPGEVFDPHLHHALMHSYRSDVSE
TTCVEIFRAGYRRGNAVLRAAQVAVAEPSEDGGDALYEDGPDAGISDRVTEVGPPGEYDA
AEGQPAAGASPGRENAPLPDDTGSVPGPDRGGPTVSAD
Download sequence
Identical sequences A8LDT4
gi|158312097|ref|YP_001504605.1| WP_012157676.1.9268 298653.Franean1_0232

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