SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_012250217.1.34756 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_012250217.1.34756
Domain Number 1 Region: 458-565
Classification Level Classification E-value
Superfamily SpoIIaa-like 0.0000000000000903
Family Anti-sigma factor antagonist SpoIIaa 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_012250217.1.34756
Sequence length 611
Comment sodium-independent anion transporter [Bordetella petrii]; AA=GCF_000067205.1; RF=representative genome; TAX=94624; STAX=94624; NAME=Bordetella petrii; strain=DSM 12804; AL=Complete Genome; RT=Major
Sequence
MGAARRVSKLASRLFGTWVDDIGPATLRADALAGLLGALLVLPQGVAFATLAGLPPEYGL
YSAIVPCVVAALFGSSRHVMSGPTNANSLALYAVLAPLAAAGSSAYIQLALAVTILVGIL
QWLVGTLRLGSLANFISPSALFGFTSGAALLIAVHALKDALGLDGIHAHAAGAVLLGVAR
GLGSLHWGALLVAAATIAASALARRWDRRKPYMLIGLAVGTALAAGLNAWVFEAAGRPIS
VLGALAQPWPPFHVPDIEWGKLPDLLGLAFALSIVALAQSISIAKAVAARSGQIIDANRE
FIGQGLSNIVGGFFSSYLSCGSLNRSIPNFESGARTPMAAVFAAVLLVALVMASAPLLAL
IPHAAIAGLLMLVAWNLLELPRWRHVARVQRSECMIALATLVATVTIRMEIAILLGTLLS
LLAYLHRTSRPAMRTMGFDAHDPDRHFAVLEGRPDALPECPQLKLLRMEGSVYFGAVAHV
ADRLQTLRAAPDAPRHLLIMAKSMNFIDHAGALLWEDELRKRREAGGDLYFHRPRPEVVQ
MWRRLGFIERLGEDHIFPDKHTAIADIYMRLDPDVCAGCTARIFRECGPLGHAGQRACGN
QAPASTGSLPR
Download sequence
Identical sequences A9HWV4
WP_012250217.1.34756 gi|163857630|ref|YP_001631928.1| 340100.Bpet3318

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]