SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for WP_012282272.1.33279 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_012282272.1.33279
Domain Number 1 Region: 788-1168
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 5.24e-137
Family PFOR PP module 0.00000000119
Further Details:      
 
Domain Number 2 Region: 415-666
Classification Level Classification E-value
Superfamily Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 1.18e-88
Family Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.0000000382
Further Details:      
 
Domain Number 3 Region: 5-258
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 1.88e-78
Family PFOR Pyr module 0.00000000897
Further Details:      
 
Domain Number 4 Region: 260-414
Classification Level Classification E-value
Superfamily TK C-terminal domain-like 4.43e-49
Family Pyruvate-ferredoxin oxidoreductase, PFOR, domain II 0.00000916
Further Details:      
 
Domain Number 5 Region: 665-833
Classification Level Classification E-value
Superfamily 4Fe-4S ferredoxins 8.37e-20
Family Ferredoxin domains from multidomain proteins 0.00028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_012282272.1.33279
Sequence length 1170
Comment pyruvate:ferredoxin (flavodoxin) oxidoreductase [Heliobacterium modesticaldum]; AA=GCF_000019165.1; RF=representative genome; TAX=498761; STAX=35701; NAME=Heliobacterium modesticaldum Ice1; strain=Ice1; ATCC 51547; AL=Complete Genome; RT=Major
Sequence
MSKVMQTMDGNKAAAYVSYAFTECAAIYPITPSSTMAEYVDEWSAQGKKNIFGQTVTVAE
MQSEAGAAGAVHGALTAGSLTTTYTASQGLLLMIPNMYKISGELLPGVMHVSARAVAGHA
LSIFGDHSDVMACRQTGWAMLASGSVQEVMDLGGIAHLAAIKSRVPFLHFFDGFRTSHEM
QKIEIIDYADFAKLVDYEAVRAFRKRGLNPEHPSVRGTAQNPDIFFQAKEACNPYYKGVA
DIVAGYMKEIGKLTGRDYLPFNYYGAPDAERIIVAMGSVCDTIEETIDYLLARGEKVGLI
KVRLYKPFSAKYFFDVLPATVQKIAVLDRCKEPGSLGEPLYEDVRTLFYDAACQPLIVGG
RYGLGSKEVLPSDIKAVFDNLKADEPKNGFTIGIVDDVTFLSLPTGSFIDTAPEGTIQCK
FWGLGSDGTVGANKQAVEIIGDHTDMYAQAYFAYDSKKSGGVTVSHLRFGHKPIKSPYLI
HKADFISCSNQSYVYNYDLLAGLKEGGVFLLNTVWSPEELEEKLPARIKRTIAEKRIRFY
TIDAVHIAKKLGLGNRTNMVMQSAFFKLANVIPIEEAVQYLKEGIKKAYGKKGESVVAMN
AAAVDQGIEALVKIDVPASWAEAVDEAAATMEVPAFIEKILQPMNALQGDKLPVSAFADA
ADGTFPVETSRYEKRGVAAFVPEWIKENCIQCNQCSFVCPHAAIRPFLLNAEEQAKAPAT
FETIKAIGGKQFEGLTYRLQVTPLDCQGCGVCVMTCPAKQKALTMKELDSQVAVQQPNWD
FATTLTIKDNLLKLDSIKGSQFAQPLLEFSGACAGCGETPYVKLITQLFGDRMIIANATG
CSSIWGASAPSVPYCTNKEGKGPAWANSLFEDNAEFGYGMHLGVSKIRAKLADLVREALT
QDIDAALKAAFNEWLVGMDDAEASKQATAKILPLLEGQTHPLLAEIADRKDYLIKKSQWI
FGGDGWAYDIGFGGLDHVLASGEDVNILVMDTEVYSNTGGQSSKATPLSAIAKFASAGKR
TKKKDLGLMAMSYGYVYVAQIAMGADMNQTIRAIKEAEAYKGPSLIIAYASCINHGLKSG
MANSQIEMARAVKSGYWHLYRFNPELKEEGKNPFILESKEPSESFRDFIMSEVRFNALCR
SYPEQAELLFSKMEQDAKERYEMYKRLASF
Download sequence
Identical sequences B0TB22
WP_012282272.1.33279 gi|167629261|ref|YP_001679760.1| 498761.HM1_0807

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]