SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_012857256.1.51747 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_012857256.1.51747
Domain Number 1 Region: 2-377
Classification Level Classification E-value
Superfamily Homocysteine S-methyltransferase 3.01e-96
Family Homocysteine S-methyltransferase 0.00000721
Further Details:      
 
Domain Number 2 Region: 874-1156
Classification Level Classification E-value
Superfamily Methionine synthase activation domain-like 2.75e-73
Family Methionine synthase SAM-binding domain 0.0015
Further Details:      
 
Domain Number 3 Region: 335-599
Classification Level Classification E-value
Superfamily Dihydropteroate synthetase-like 3.14e-71
Family Methyltetrahydrofolate-utiluzing methyltransferases 0.00052
Further Details:      
 
Domain Number 4 Region: 712-839
Classification Level Classification E-value
Superfamily Cobalamin (vitamin B12)-binding domain 9.42e-38
Family Cobalamin (vitamin B12)-binding domain 0.00013
Further Details:      
 
Domain Number 5 Region: 626-707
Classification Level Classification E-value
Superfamily Methionine synthase domain 4.32e-20
Family Methionine synthase domain 0.001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_012857256.1.51747
Sequence length 1156
Comment methionine synthase [Sulfurospirillum deleyianum]; AA=GCF_000024885.1; RF=representative genome; TAX=525898; STAX=65553; NAME=Sulfurospirillum deleyianum DSM 6946; strain=DSM 6946; AL=Complete Genome; RT=Major
Sequence
MATLQELISEKILIIDGAMGTQIQALQIPLEKWEGKEGCNELLNVTCKDEISKIHRGYLL
AGADIIKTNTFGALPWVLDDYGIGDRTYELARTGVEIVKEACLAFSSEDKPRFCAAAFGP
GTKLPSLGHIGYDEMYAGYRVAATGAIEGGCDVFLIETAQDPLQIKAALHAIFDAQTSLH
VKLPVMVSVTIELSGTMLIGTDATTIATILEPFDIMSLGFNCGTGPEQVEKHVKTLSSVW
SKPISVHANAGLPQNRGGYTFYPMGPREFAELQEKFTQIAGVAILGGCCGTTPQHILELS
KRVEGKKLLAPQGEMARSIASLFEVRALKQDPAPFLIGERSNATGSKAFRELLLAEDYDG
TLSVAQQQVRSGAHGIDVSVGFAGRDEIKDTTAVVGRYVQKILLPLMPDTTQVPALECAL
KLIGSKPIINSVNLEDGIEKFDKVCSLAKRFGCALVCLTIDEQGMAKTKAQKVAIAERIF
QLATTKHGINAGDLVFDLLTFTVGSGDAEYHTAAIETIEAIREFHAMHPEVGFVLGISNI
SFGLAKHAREYLNSVFLHHCVEAGLSMAIVNVKNTLPMHKISDIDKKVCEDLLFNRREEG
DPLFKFISHFEGVVENKDESDAAYLAMSTKEKIATLLIDGDKERMLALLPTAKEEIAAEV
IVNEILIDAMKVVGELFGSGKMQLPFVLQSAEVMKASVDYLQPYLPKTEKSTTTTLIIGT
VKGDVHDVGKNLVDIILSNNGFKVVNIGIKADLEQFLEALKEHKADAIGMSGLLVKSTNV
MKENLEAMQKMGLNIPVILGGAALTDNFVEDFCRPIYEGPIFYCKDAFEGITAMSRIEAK
NYDTDFGRKVLENAVVRANKETKEIPPFSEIKMPSRELKIPTPPFWGRRVLKTDVKELAY
SWINHKILFAQRWGYSGKGQSKEEKQKQLDEVLYPTYERVKADIERLGLFEPTLIYGYYP
ARSHENKLYLFDESEGYFSKEQVCRERVDVVAKRALKTFDFPRQNRNPYRSLSDFIAPDR
HDVLALTCVSAGAKFSAYEKELYDAGNFKEYFFVHGLGVELAEALAEIVHKQIRLDLGVA
QHEGHSLRDVQMKRYHGCRYSFGYPACPNLEDTRVIFDLLKPEEFGIELSETFQIHPEQS
TTAIVMHHKEALYFNV
Download sequence
Identical sequences D1B335
WP_012857256.1.51747 525898.Sdel_1488 gi|268680109|ref|YP_003304540.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]