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Domain assignment for WP_012887686.1.100029 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_012887686.1.100029
Domain Number 1 Region: 353-979
Classification Level Classification E-value
Superfamily Six-hairpin glycosidases 6.24e-292
Family Cellulases catalytic domain 0.000000000000457
Further Details:      
 
Domain Number 2 Region: 44-144
Classification Level Classification E-value
Superfamily Carbohydrate-binding domain 2.51e-29
Family Cellulose-binding domain family II 0.0000487
Further Details:      
 
Domain Number 3 Region: 148-241
Classification Level Classification E-value
Superfamily PKD domain 0.0000576
Family PKD domain 0.012
Further Details:      
 
Weak hits

Sequence:  WP_012887686.1.100029
Domain Number - Region: 249-351
Classification Level Classification E-value
Superfamily CalX-like 0.0199
Family CalX-beta domain 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_012887686.1.100029
Sequence length 979
Comment cellulose 1,4-beta-cellobiosidase [Streptosporangium roseum]; AA=GCF_000024865.1; RF=representative genome; TAX=479432; STAX=2001; NAME=Streptosporangium roseum DSM 43021; strain=DSM 43021; AL=Complete Genome; RT=Major
Sequence
MPRFPIRAGALPRFRRRVAALALLSLAAGTTTALAASPAVAAISCEVTYATNDWQGGFTA
NVSIKNLGDPLNGWTLGFTFPDAAQKVTQGWSATWSQSGQAVTARNLDWNGNLATGASTS
IGFNGSWSGANPKPAAFTINGTTCGGTGPVNQPPTAKITKPVAGATFTAPATVDITADAA
DGDGTVAKVEFFNGTTLLGTDTTAPYAYSWAAVPAGDYSLTAKATDDKGSATTSAPVGIS
VQANSAPAVLLTPATLAVPEGGGADLSVKLSKAPSANVTVTTARTSGDADLTVASGGSLT
FTPANWNTAQTVRVAAAEDTDQTSGSAEFTSTATGHTPAKATATEVDNDTPGGDNEYVKR
FTTMYNKLKDPANGYFSPQGVPYHSVETFMVEAPDHGHETTSEAYSYYLWLEAAYGKVTG
DWSRFNDAWASMEKYIIPATADQPTNSFYNPSKPATYAGEWDDIKQYPSKLDGGVSVGSD
PIANELKTAYGTNDVYGMHWLLDVDNTYGFGRCGDGTTKPAYINTYQRGPEESVFETIPQ
PSCDTFKHGGKNGYLDLFTGDSSYAKQWKYTNAPDADARAVQVAYWAHTWAKEQGKEAQV
ASSVTKAAKMGDYLRYAMYDKYFKKQGCTSTTCPAGTGKDSSAYLLSWYYAWGGANDTSA
GWAWRIGSSHNHSGYQNPMAAWALSSVDALKPKGATAVQDWSTSLKRQLEFYRWLQSSEG
AIAGGATNSWQGHYAAPPSTLPTFYGMAYDWQPVYHDPPSNQWFGFQAWSMERVAELYYA
TGNADAKLVLDKWVKWATDNTTVNADGTFRIPSTLVWTGQPDTWNSGNPGPNAGLHVSIR
DYTSDVGVAGSYAKVLTYYAAKSGNATAKAVAKGLLDGLWKNNQDAKGVSVPETKADYNR
LNDPVYVPPGWTGKMPNGDVIDSSSTFMSIRSFYKNDPDWPKVDAYLKGTGPVPSFNYHR
FWAQVDVAVALAEYGRLFP
Download sequence
Identical sequences D2B809
WP_012887686.1.100029 479432.Sros_0936 gi|271962487|ref|YP_003336683.1|

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