SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for WP_013048309.1.58668 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  WP_013048309.1.58668
Domain Number - Region: 279-383
Classification Level Classification E-value
Superfamily 2-methylcitrate dehydratase PrpD 0.00589
Family 2-methylcitrate dehydratase PrpD 0.024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_013048309.1.58668
Sequence length 432
Comment hypothetical protein [Aminobacterium colombiense]; AA=GCF_000025885.1; RF=representative genome; TAX=572547; STAX=81468; NAME=Aminobacterium colombiense DSM 12261; strain=DSM 12261; AL=Complete Genome; RT=Major
Sequence
MTSKLLLEILKEHTFLTVGCTDPVAVGLSAAFAYKAIGGEIFSVDVIMDKNIYKDAISVG
IPGTMKTGLDLAVSLSVLFGNPENGLRLLKDVDKQCVVKAEKFLSNHKISFSLNEEVEGI
YIKSIVKTSKGIATALIRNSHDNIVEITVNQKITYSKRYSSAPKDSFNKLGCIANLTVED
IFKFIKEIDSKEIAFLNQGIQTNLKAAQIGEKKRVGLGVGKLYQEMIEKRYLPDDVSSRV
KQKVGAAADARMSGMNVPIYGCFGSGNHGITLFITMGMMAEHLKISKEETSRALSIALLI
IGVIKTRTGILTPHCGCSVAAGAGAASGIAYMLGGKEKEVENTVHLMLANLTGMLCDGAK
YGCALKMATSAGAAIECAYMAMLNAKVPGNNGIVGWNMKQTMDNLKIITEYGMKNIDKSV
LAILLKLPYFEN
Download sequence
Identical sequences D5EER4
gi|294101912|ref|YP_003553770.1| WP_013048309.1.58668

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]