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Domain assignment for WP_013048692.1.58668 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_013048692.1.58668
Domain Number 1 Region: 97-230
Classification Level Classification E-value
Superfamily GntR ligand-binding domain-like 5.23e-23
Family GntR ligand-binding domain-like 0.015
Further Details:      
 
Domain Number 2 Region: 7-78
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 9.66e-20
Family GntR-like transcriptional regulators 0.046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_013048692.1.58668
Sequence length 234
Comment regulatory protein GntR HTH [Aminobacterium colombiense]; AA=GCF_000025885.1; RF=representative genome; TAX=572547; STAX=81468; NAME=Aminobacterium colombiense DSM 12261; strain=DSM 12261; AL=Complete Genome; RT=Major
Sequence
MGISFTKINRQSVTESIVEAFKQKILNGEISSGDKLPSERDLVESFGVSRASVREALRAL
RYMGVLEVHSGEGTFLTENISLLSDHFKISLLLKQCSVRELVEARKIIECETVSLATIRS
SKEEKEALKKLHKYAMTLVDDEQPFLKADFAFHEKIAEMSQNMVLVEMLNATRDLTLSEN
MYVIEREGQIKRALDFHSSILYYILSFDADNAQKAMLAHLEDIERSIRDLVSRH
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Identical sequences D5EFU7
WP_013048692.1.58668 gi|294102295|ref|YP_003554153.1|

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