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Domain assignment for WP_013151963.1.87825 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_013151963.1.87825
Domain Number 1 Region: 78-306
Classification Level Classification E-value
Superfamily Pseudouridine synthase 2.08e-66
Family Pseudouridine synthase RsuA/RluD 0.0000128
Further Details:      
 
Domain Number 2 Region: 12-105
Classification Level Classification E-value
Superfamily Alpha-L RNA-binding motif 0.00000000209
Family Ribosomal protein S4 0.042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_013151963.1.87825
Sequence length 308
Comment RNA pseudouridine synthase [Nocardiopsis dassonvillei]; AA=GCF_001877055.1; RF=na; TAX=2014; STAX=2014; NAME=Nocardiopsis dassonvillei; strain=NOCA502F; AL=Complete Genome; RT=Major
Sequence
MSDVRSLPVPDGLEGDRLDSAIARMFGLSRTRAAEIIGDGGVLVDGSEAAKSDRVSAGAW
LEVTLPPPPTAPVPRPEAVPGMRIVHEDTDIIVVDKPVGVVAHPTVGWTGPSVLEGLLAS
GVQVATSGAAERQGIVHRLDANTTGLMVVAKSETAYSVLKRAFKERTVDKHYHTLVQGHP
DPLRGTVDAPIDRHPAGDGRWAVVAGGRPSVTHYDTQEAFRAASLLEIKLETGRTHQIRV
HMSALRHPCVGDMLYGADPTLAERLGVRRQWLHAVRLGFDHPTEHRPVEFSSPYPDDLAA
AVETLRED
Download sequence
Identical sequences D7B0E9
gi|297559888|ref|YP_003678862.1| WP_013151963.1.70090 WP_013151963.1.87825

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