SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for WP_013202837.1.56564 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_013202837.1.56564
Domain Number 1 Region: 23-301
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 5.41e-83
Family L-arabinose binding protein-like 0.0000103
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_013202837.1.56564
Sequence length 307
Comment sugar ABC transporter substrate-binding protein [Erwinia billingiae]; AA=GCF_000196615.1; RF=representative genome; TAX=634500; STAX=182337; NAME=Erwinia billingiae Eb661; strain=Eb661; AL=Complete Genome; RT=Major
Sequence
MNVKKTILASLLVCMLPVSVFAKDLQVGVSMALFDDNFLTILRTSMQKEMQKEGVKGQVE
DAKGDVAQQLSQVQNFIGQGVDAIIVNPVDTNAVKPIMDLAAKASIPLIFVNREPAQPLV
DKMAYVGSDSELAGRLQMEALAKNMNYKGNVAILLGDLANESTRKRTAGVKAIIAKYPGM
KVTKEQTAKFTRNDAVDVVSNWLTAGDDINAIAANNDEMAIGALQALGKNDSHILVAGVD
GTPDALQMIKNGKMVATVFQDAKGQGEGAVKTAVKLANGEKVQKIVDIPFQLITKDNYEK
FTSMNQK
Download sequence
Identical sequences D8MU45
gi|300717396|ref|YP_003742199.1| WP_013202837.1.56564

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]