SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for WP_013247882.1.96234 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_013247882.1.96234
Domain Number 1 Region: 2-123
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 1.11e-52
Family Cold shock DNA-binding domain-like 0.0000029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_013247882.1.96234
Sequence length 123
Comment MULTISPECIES: 30S ribosomal protein S12 [Nitrospira]; AA=GCF_900170025.1; RF=na; TAX=1658518; STAX=1658518; NAME=Nitrospira sp. ND1; AL=Contig; RT=Major
Sequence
MPTINQLVRKGRTLVKSKTKSPALKRCPQKRGVCLRVYTTTPKKPNSALRKVARVRLTNG
MEVTTYIPGVGHNLQEHSIVLVRGGRVKDLPGVRYHIVRGSLDAVGVADRKQARSKYGAK
RPK
Download sequence
Identical sequences A0A1W1HR79 D8PCU7
WP_013247882.1.3676 WP_013247882.1.96234 gi|302036660|ref|YP_003796982.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]