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Domain assignment for WP_013292810.1.12990 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_013292810.1.12990
Domain Number 1 Region: 891-1137
Classification Level Classification E-value
Superfamily EAL domain-like 1.44e-93
Family EAL domain 0.0018
Further Details:      
 
Domain Number 2 Region: 717-875
Classification Level Classification E-value
Superfamily Nucleotide cyclase 5.65e-35
Family GGDEF domain 0.00068
Further Details:      
 
Domain Number 3 Region: 1150-1268
Classification Level Classification E-value
Superfamily CheY-like 5.27e-31
Family CheY-related 0.0041
Further Details:      
 
Domain Number 4 Region: 597-698
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 1.54e-29
Family Flavin-binding PAS domain 0.04
Further Details:      
 
Domain Number 5 Region: 130-257
Classification Level Classification E-value
Superfamily CBS-domain pair 6.32e-26
Family CBS-domain pair 0.00078
Further Details:      
 
Domain Number 6 Region: 1-117
Classification Level Classification E-value
Superfamily CBS-domain pair 1.23e-25
Family CBS-domain pair 0.00063
Further Details:      
 
Domain Number 7 Region: 429-578
Classification Level Classification E-value
Superfamily GAF domain-like 0.0000000000000048
Family GAF domain 0.031
Further Details:      
 
Domain Number 8 Region: 278-398
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 0.00000000000000725
Family Hypoxia-inducible factor Hif2a, C-terminal domain 0.067
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_013292810.1.12990
Sequence length 1275
Comment response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) [Gallionella capsiferriformans]; AA=GCF_000145255.1; RF=representative genome; TAX=395494; STAX=370405; NAME=Gallionella capsiferriformans ES-2; strain=ES-2; AL=Complete Genome; RT=Major
Sequence
MTIANIMTRNVAQIDLRQPMSVATEMMQRMQISCLLVIENNLPVGILTERDVVRGTASGF
TTAQPVAELMSTPLRSIEQTASKSEAYHTLIKHGIRHLRVIDEHGNTTGIVSETDFRNQA
SIEHFLQLRDVGSAMSADILMLSEQASVADAANAMTKSRTDYVLVGENRCTTGILTERDI
VRLFGQDDPRRVLREVMSKPVAKVARQTQLKDAAKKMQDEGIRRLVVEDDAGQVIGVLTE
HDVVKPLEEDYVDILQAIIDSQSIKLNQLQADMLNRQLAESIMAWKRPFLDLLDNLPLKV
FIKDTRSNYIACNKSYADDLGIQQSEIAGKSDLDFYPASLAQHYREDDARVIESDQTITM
VGPYLAGSRQTWVQISKSPWHDGRGDIGGVIGIFQDVTHEYQMNKALQRKAQLYEVSSQV
NSAIIHLQDTQSLLDKVCDIILSFSGFRLAWIGRENSEQQVVPVAIAGQARDYVSDLSLS
TQTGLPGAQGPAATAINENRIVVVDDFLNDPMSLAWHEAAAQYALHGNISLPINAPDFRG
ALMVYADTVNFFDHEVILLLKELSEDISFALKQIHINTIKRQQETELKLAEQVFSRSADA
MIITNPDNNIVRVNQAFCEITGYTSEEVIGKNPRILKSEKQDHDFFRSLWRSLELQGSWQ
GEIWNRRKNGEIYPEWSSINAVKDASGRVVNYFAVFSDLLQKKALAELDHLKHYDALTDL
PNRALLEDRIESSITHARQYERFIGVIFLNLDHFHTVNDMLSHAGGDQVLIATAKRLMDA
APAQASISRLSADTFVIALPDLNTSEEINRTAELIAQKIYQPLTVADQSVQLSARMGISV
YPIDGNDATTLMKHADAALADAKQCGVRNSFRFYSSSMNEHAHKLLTMGAELRNAISQNR
LVLHYQPQVDIITGQIIGAEALIRINHPERGIISPGEFISVAEETGLIIPMGTWVIREAC
RQMQQWHLDKNIELTIAINLSPLQLHQSDLPEIVSLALHDSGLNARYLELEFTESAIMKN
VRETVAIMNKFKAMGLHLSIDDFGTGYSSLSYLKQFPVDKLKIDQSFVSNITQDPNDAAI
VQAIIALGRTLGMTTIAEGVETEAQLGYLRSVNCKEMQGYLYSAPLPAEEFAALLVRGKM
MADNKSEKILLLVDDEENVLLSLKRILRREGYQILTATSAEEGLEIMAKHQVNVVLSDQR
MPGMSGVEFLRRVKTMHPNVVRMILSGYTEIGTLTDAINKGEIYQFITKPWENEALTAMI
REAFVRYEILKRPVE
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Identical sequences D9SE93
gi|302878069|ref|YP_003846633.1| WP_013292810.1.12990

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