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Domain assignment for WP_013294275.1.12990 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_013294275.1.12990
Domain Number 1 Region: 305-460
Classification Level Classification E-value
Superfamily Nucleotide cyclase 2.9e-51
Family GGDEF domain 0.00011
Further Details:      
 
Domain Number 2 Region: 180-287
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 1.36e-29
Family Flavin-binding PAS domain 0.016
Further Details:      
 
Domain Number 3 Region: 27-169
Classification Level Classification E-value
Superfamily GAF domain-like 1.32e-26
Family GAF domain 0.04
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_013294275.1.12990
Sequence length 462
Comment PAS/PAC and GAF sensor-containing diguanylate cyclase [Gallionella capsiferriformans]; AA=GCF_000145255.1; RF=representative genome; TAX=395494; STAX=370405; NAME=Gallionella capsiferriformans ES-2; strain=ES-2; AL=Complete Genome; RT=Major
Sequence
MKIAPLPHNERERLEELRKYGILDTEPEAVFNSMVQLASYICHTPFAAISLIDEHRQWFK
AIVGVEVSETPRDVAFCAHTILQQETMIVPNTLEDERFCDNPFVEGGLNLRFYAGVPLVT
ESGYRLGTLCVFDQQPRQLSAEQLDAIKTLADSVMAHLDLRLSHREIRKYVDDLQLAASI
FESASEAVLVTDPQNHIITVNPAFTAMTGYSLSEVAGKNPNILCSGKQSPAFYQRMWQSL
ADMGHWSGELWNKRKNGELFAEWLSINVLFNEDGSKRMYVAIFSDVTEKKQADEIIWRQA
NYDMLTQLPNRRLFCDRLEHEIRGAHRAGCLLALLFIDLDLFKEVNDSLGHEAGDALLVK
VAERLTASVRESDTVARMGGDEFTAILPQIDSLEDVERVAALIVKALSEPFEVNGAIVNI
SASVGVAIYPRDAKNTTELLSQADSAMYVAKEQGRGCYRMAN
Download sequence
Identical sequences D9SJG4
gi|302879552|ref|YP_003848116.1| WP_013294275.1.12990

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