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Domain assignment for WP_013452562.1.33346 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_013452562.1.33346
Domain Number 1 Region: 293-520
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.15e-37
Family ABC transporter ATPase domain-like 0.0003
Further Details:      
 
Domain Number 2 Region: 71-289
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain III 4.97e-16
Family DNA repair protein MutS, domain III 0.01
Further Details:      
 
Domain Number 3 Region: 721-795
Classification Level Classification E-value
Superfamily SMR domain-like 0.0000000111
Family Smr domain 0.0094
Further Details:      
 
Weak hits

Sequence:  WP_013452562.1.33346
Domain Number - Region: 573-624
Classification Level Classification E-value
Superfamily F1F0 ATP synthase subunit B, membrane domain 0.00484
Family F1F0 ATP synthase subunit B, membrane domain 0.0025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_013452562.1.33346
Sequence length 798
Comment endonuclease MutS2 [Marivirga tractuosa]; AA=GCF_000183425.1; RF=representative genome; TAX=643867; STAX=1006; NAME=Marivirga tractuosa DSM 4126; strain=DSM 4126; AL=Complete Genome; RT=Major
Sequence
MILPLDFEQRIGFDKVRDLISAECSSNLGQEIVEKMGYIRKFDKLEPLLLQTDEFLKIFH
SGEYFPSGNFIDVSHFIKRAKVNGAFLTEEEFFDLKLSLKTILDCISFFDEFEEEYPYLF
NLRKAVNLEPDLYKAIDAKIDERGSLRNNASSALQQIRSDIFRAQAQLRRQVEKIYKQAS
ANKYTPEDASITVRDGRIVIPVLAEYKRRVKGFIHDQSGTGQTVYIEPTEALELNNEVRE
LQYAERREIVKILTQLTALVKPELENLEKAYKFLAIVDFIRAKARFAQKIGAVFPQLENS
RIIEFRNAEHPLLKLSLAEQNKKVIPLSIQLKGDKRILIISGPNAGGKSVALKTVGLLQF
MLQCGLLIPVHPDSKCGIFANLFIDIGDQQSIENDLSTYSSHLQNMKNFLLNSNKQTLFL
IDEFGTGTEPRFGGAIAESILEELYSQKAFGVITTHYDNIKNFAVKNQNVINGAMKFDER
NLEPLYELEIGKPGSSFAIEVAEKMGIPPTILNKAKGKIGTERVNYDKLLNQLGKEKREL
EAKIKEIQKREEHLEKSAQDYDELNEFLKTQKKQIITEAKQEAKSIIKEANKRVEQAIRE
IKESQAEKERTKKARKQLSDYDQKMEPLVENKPAKSSKPVFKTAEGEIKVGDYVKIKGQD
TIGEVLSLGQKEAEIMLGELKSKIKLNRLERMSKTAIKKEKKKSFSGTSTGMIERSTNFK
HQIDVRGMRAEEAIQAVDRFIDDAMVLGYNEVSILHGRGDGILRKFIRDYLKQYNYVKSL
KNEHEERGGDGITLVGLS
Download sequence
Identical sequences E4TNF4
WP_013452562.1.33346 gi|313674523|ref|YP_004052519.1|

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