SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for WP_013562115.1.43297 from NCBI 2017_08 genome

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  WP_013562115.1.43297
Domain Number 1 Region: 7-188
Classification Level Classification E-value
Superfamily LigT-like 2.09e-41
Family 2'-5' RNA ligase LigT 0.0014
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_013562115.1.43297
Sequence length 191
Comment MULTISPECIES: RNA 2',3'-cyclic phosphodiesterase [Desulfurococcus]; AA=GCF_000186365.1; RF=representative genome; TAX=765177; STAX=2275; NAME=Desulfurococcus mucosus DSM 2162; strain=DSM 2162; AL=Complete Genome; RT=Major
Download sequence
Identical sequences E8R8R7
WP_013562115.1.43297 WP_013562115.1.60640 gi|320100783|ref|YP_004176375.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]