SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for WP_015233380.1.71579 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_015233380.1.71579
Domain Number 1 Region: 18-135
Classification Level Classification E-value
Superfamily Homeodomain-like 4.9e-16
Family Cgl2762-like 0.052
Further Details:      
 
Weak hits

Sequence:  WP_015233380.1.71579
Domain Number - Region: 247-361
Classification Level Classification E-value
Superfamily Ribonuclease H-like 0.00102
Family DnaQ-like 3'-5' exonuclease 0.084
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_015233380.1.71579
Sequence length 367
Comment IS630 family transposase ISNagr8 [Natronobacterium gregoryi]; AA=GCF_000230715.2; RF=representative genome; TAX=797304; STAX=44930; NAME=Natronobacterium gregoryi SP2; strain=SP2; AL=Complete Genome; RT=Major
Sequence
MGGDRRGELVRHLSEEELDRLLDEADDPKVVKRLTFVKRLYKGATYEEAADDVGKSASTG
SRWARRWNDGGLGQLTPNFGGGRPPKLGDEEQECLLELLREGQPWKAQEVHQLLDEEFDV
EYHPDYLGRFLRNLGLSYAKPRPKRPSRPENADEILEERVADAFDEETETAHNKRPEDED
EGWVLDDDICTDGGTIVGFCDASHPQPYDNSHRLWYVDDPTLERPLVKLDEPAVGCYTLN
GESVLTFPEDQSKENICALLEEVREQNPGTRILLVLDNFSSHICEHTRKRAHQLGIDLVF
LPVGSPHLNPIEQVWKVLKRNASPIVVASESAFRTLARRLFNTLTDRLGFAKSWIDQFLS
PYLQKLS
Download sequence
Identical sequences A0A1I3U2T7 G4G4Y7
WP_015233380.1.71579 WP_015233380.1.8181 gi|429191182|ref|YP_007176860.1| gi|429191362|ref|YP_007177040.1| gi|429193216|ref|YP_007178894.1| gi|429193528|ref|YP_007179206.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]