SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for WP_015843006.1.29859 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_015843006.1.29859
Domain Number 1 Region: 209-402
Classification Level Classification E-value
Superfamily PheT/TilS domain 4.71e-73
Family B3/B4 domain of PheRS, PheT 0.0000028
Further Details:      
 
Domain Number 2 Region: 37-199
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 3.67e-49
Family Myf domain 0.003
Further Details:      
 
Domain Number 3 Region: 477-707
Classification Level Classification E-value
Superfamily Class II aaRS and biotin synthetases 3.48e-48
Family Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 0.00021
Further Details:      
 
Domain Number 4 Region: 717-814
Classification Level Classification E-value
Superfamily Anticodon-binding domain of PheRS 4.45e-30
Family Anticodon-binding domain of PheRS 0.00048
Further Details:      
 
Domain Number 5 Region: 411-485
Classification Level Classification E-value
Superfamily Putative DNA-binding domain 4.49e-17
Family Domains B1 and B5 of PheRS-beta, PheT 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_015843006.1.29859
Sequence length 815
Comment phenylalanine--tRNA ligase subunit beta [Paenibacillus sp. JDR-2]; AA=GCF_000023585.1; RF=na; TAX=324057; STAX=324057; NAME=Paenibacillus sp. JDR-2; strain=JDR-2; AL=Complete Genome; RT=Major
Sequence
MKVSYQWLNKYIDLTGYTAEELAEKMTRGGIEIDSVESLNKGVSGVVVGYVKSREKHPDA
DKLSVCKIDVGTGEELQIVCGAKNVDAGQKVPVAMIGAKLPGDFAIKRAKLRGVESQGMI
CSAKELGINDKLLPKEQQEGILVLPESTPVGTPIGEVLGINDEVLELDLTPNRSDCLSML
GVAHEIGALTGREVRIPEPAVNHAADRADSHIAVSISAPEQCSHYSARYIKGVKIGPSPQ
WLQNRLIAAGVRPISNVVDVTNFVMLEYGQPLHAFDADAITTGRIDVRLAKQGEKIVTLD
DQERTLEPQMLVITDGEKPVALAGVMGGASSEVNDKTVNILLESAKFDGGTVRKTSRQLG
LRSESSIRFEKEVDPARVIPALNRAAALIAELADGLVAEGIVEAVVTKTEPAVVEVTLDK
INGYLGTELSRLEVQTIFDRLHFSYRLSDANDQFAVTVPTRRGDITRDVDLIEEVARLFG
YDNIPTTPIHGDVTPGGLTKPQTIRRELRRRLTDAGLYEVISYSFTGPSRTELFPELTGK
DLKAVKLAMPMSEDRSVLRTTLIAQLIETATYNRNRKNESSAIFEIGSVFHTEEEQLTRL
PEEKQRLAVLLTGNRVDAQWNRKAEPVDFYDAKGVLETVIDVLGLTSKVRYESAQPANFH
PGRTAAVIVDTAHGPETIGYVGQLHPTLQHESDLADTYVVEVELGTLYGLADTAIEYKVL
PRYPAMQRDIAVVLEQAVPAAKLTAIAWAVAGELLESVRVFDVFTGEKLGAGKKSVALSL
VYRHADRTLTDEEVTELHGKVVAELEQSFAAELRK
Download sequence
Identical sequences C6CWJ5
324057.Pjdr2_1384 gi|251795415|ref|YP_003010146.1| WP_015843006.1.29859

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