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Domain assignment for WP_020460571.1.9268 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_020460571.1.9268
Domain Number 1 Region: 24-134
Classification Level Classification E-value
Superfamily Homeodomain-like 1.43e-18
Family Tetracyclin repressor-like, N-terminal domain 0.078
Further Details:      
 
Domain Number 2 Region: 210-334
Classification Level Classification E-value
Superfamily Ribonuclease H-like 0.000000569
Family mu transposase, core domain 0.068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_020460571.1.9268
Sequence length 363
Comment integrase [Frankia sp. EAN1pec]; AA=GCF_000018005.1; RF=na; TAX=298653; STAX=298653; NAME=Frankia sp. EAN1pec; strain=EAN1.pec; AL=Complete Genome; RT=Major
Sequence
MILTDNQRNILESLAGGGGYDRSAAARARMVLWRDEGFSVREIAEKAGASKPTVRLWLSR
YDEEGPDGLLSRVSPGRPREVPGRVRARILALTRTTPPPETGLSHWTSTEMARYLKRREG
VSVSHTFVAQLWRENNLQPHRHRVFKLSADPDFEAKVEDVVGLYLDPPEGAEVLSIDEKP
GVQARDRTQPPRPVASGRVATRTHDYQRKGTTDLFAALDVGTGRVTARCFPSHTRADFLT
FMDQVIAEYGGAELHVVVDNLATHYGPDVDTWLRRHKNVAFHFTPSGGSWLNQVENWFGI
LTRHALQRGAFVSVQDLVNTINNYVKNWNWDAHPFEWTATAEEIVAKVEVLHREFRKLLA
NNL
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Identical sequences A8LBQ2
298653.Franean1_3003 WP_020460571.1.9268 gi|158314818|ref|YP_001507326.1|

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