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Domain assignment for WP_020464016.1.9268 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_020464016.1.9268
Domain Number 1 Region: 262-312
Classification Level Classification E-value
Superfamily Homeodomain-like 0.00000000000296
Family AraC type transcriptional activator 0.0051
Further Details:      
 
Domain Number 2 Region: 210-259
Classification Level Classification E-value
Superfamily Homeodomain-like 0.0000493
Family FIS-like 0.068
Further Details:      
 
Weak hits

Sequence:  WP_020464016.1.9268
Domain Number - Region: 35-103,133-185
Classification Level Classification E-value
Superfamily Regulatory protein AraC 0.011
Family Regulatory protein AraC 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_020464016.1.9268
Sequence length 330
Comment AraC family transcriptional regulator [Frankia sp. EAN1pec]; AA=GCF_000018005.1; RF=na; TAX=298653; STAX=298653; NAME=Frankia sp. EAN1pec; strain=EAN1.pec; AL=Complete Genome; RT=Major
Sequence
MDVLSDAVTMLRTGRPHSNSNRLWAPWGIRFPPTDGAGFHIVLMGTCWLLRAGARPLRLA
AGDIVLLPREPGHALADDPASPLTDFRADPHGPIPSEHADGYGGSGPGGRTVTELLCGAY
MFDRFRLHPLLADLPDVIHLPARVGHHPRLRAAVDLLGAELAEPRAGAAASMSALLDLLL
LYMLRAWFDDHSTGSSTGSSTGWSAALADPAVSAALRAMHAEPEMPWTVRELGARVGLSR
TVFAQRFTALVGKPPLAYLTWWRMTMAARLLRETDSPLPAVARRCGYSSEFAFAKTFKRE
FGVPPGAFRREGRPPSGSPADASPLTATLS
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Identical sequences A8KZG5
298653.Franean1_6608 WP_020464016.1.9268 gi|158318343|ref|YP_001510851.1|

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