SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for WP_023381288.1.72310 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_023381288.1.72310
Domain Number 1 Region: 91-200,231-290
Classification Level Classification E-value
Superfamily ClpP/crotonase 5.72e-27
Family Biotin dependent carboxylase carboxyltransferase domain 0.07
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_023381288.1.72310
Sequence length 339
Comment MULTISPECIES: protease SohB [Pseudomonas]; AA=GCF_000494915.1; RF=na; TAX=69328; STAX=69328; NAME=Pseudomonas sp. VLB120; strain=VLB120; AL=Complete Genome; RT=Major
Sequence
MEFLAEYASFLAKTATLVIAILVVLSAIAGMRGKGRRKSGGQLQVTRLNEFYKELRERLE
AGLLDKAQLKALRKQQAKAEKQQKKGKAEEKRRVFVLDFDGDIKASATESLRNEITALLT
LATPRDEVVLRLESGGGLVHSYGLAASQLARIRQAGIPLTVCIDKVAASGGYMMACIGEK
IVSAPFAVLGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTVFGENTEKGREKFQE
DLDITHQLFKDFVSRYRPQLHIDEVATGEVWLGVAALNRKLVDTLQTSDEYLSECAREAN
LFHVHYAERKSLQERIGMAASGTVENAVVGLWSKLGRLR
Download sequence
Identical sequences U5VJR3
gi|557223887|ref|YP_008764102.1| WP_023381288.1.72310 WP_023381288.1.91273

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]