SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for WP_024086580.1.23948 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_024086580.1.23948
Domain Number 1 Region: 81-208
Classification Level Classification E-value
Superfamily Tetracyclin repressor-like, C-terminal domain 1.33e-40
Family Tetracyclin repressor-like, C-terminal domain 0.000000792
Further Details:      
 
Domain Number 2 Region: 4-74
Classification Level Classification E-value
Superfamily Homeodomain-like 3.49e-18
Family Tetracyclin repressor-like, N-terminal domain 0.0000514
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_024086580.1.23948
Sequence length 237
Comment TetR family transcriptional regulator [Pseudomonas monteilii]; AA=GCF_000510285.1; RF=na; TAX=1435044; STAX=76759; NAME=Pseudomonas monteilii SB3078; strain=SB3078; AL=Complete Genome; RT=Major
Sequence
MAQSETVERILDAAEQLFAERGFAETSLRLITSKAGVNLAAVNYHFGSKKALIQAVFSRF
LGPFCASLERELERRQAKPEHKPSLEELLEMLVEQALAVQPRSNNDLSIFMRLLGLAFSQ
SQGHLRRYLEDMYGKVFRRYMLLVNEAAPRIPPLELFWRVHFMLGAAAFSMSGIKALRAI
AETDFGINTSIEQVMRLMVPFLAAGMRADSGITDDAMAAAQLRPRTKTSAGATTAKA
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Identical sequences V9UV14
WP_024086580.1.23948 WP_024086580.1.28354 gi|568181126|ref|YP_008953663.1| gi|568186557|ref|YP_008959092.1|

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