SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_068754796.1.71320 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_068754796.1.71320
Domain Number 1 Region: 341-980
Classification Level Classification E-value
Superfamily Six-hairpin glycosidases 1.56e-284
Family Cellulases catalytic domain 0.00000000000337
Further Details:      
 
Domain Number 2 Region: 37-139
Classification Level Classification E-value
Superfamily Carbohydrate-binding domain 7.67e-34
Family Cellulose-binding domain family II 0.00016
Further Details:      
 
Domain Number 3 Region: 155-238
Classification Level Classification E-value
Superfamily PKD domain 0.0000053
Family PKD domain 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_068754796.1.71320
Sequence length 981
Comment cellulose 1,4-beta-cellobiosidase [Thermobifida cellulosilytica]; AA=GCF_001517975.1; RF=representative genome; TAX=665004; STAX=144786; NAME=Thermobifida cellulosilytica TB100; strain=TB100; AL=Scaffold; RT=Major
Sequence
MRTLLSPRRWRAAASGVIAAALAAAVLSPGVAHAAVACSVDYNDSNDWGSGFVAEVKVTN
EGNEPIQNWTVGWTFPGNQQITNLWNGTVSQSGPNVTVTYPAWNTTIAPGSTVSFGFQAT
YSGSNNAPQSFTVNGVTCNGAQPANLPPEVTLTAPANNSTFLVSEPIQFTATASDPDGTI
DRVEFAVGNTVIGTDTTSPYSYTWTNPTVGSHSVTAIAYDDDGARTVSSPVAVRVLDAAA
VIASPATVRVPQGGTAEFEVKLSNQPSGNVTATVARTSGSSDLTVSGSSQLQFTPNNWNT
PQKVTVASADNGGELAEAVFTVSAPGHDPAEVTVREIDPNTSSYDQAFLEQYEKIKDPSS
GYFREFDGLLVPYHSVETMIVEAPDHGHQTTSEAFSYYLWLEAYYGRVTGDWEPLREAWE
SMETFIIPGTADQPTNGAYNPSSPATYIPEQPNSDGYPSPLTNGVPVGQDPLASELRSTY
GTSEVYGMHWLLDVDNVYGFGFCGDGSDDAPAYINTYQRGARESVWETIPHPSCDDFSHG
GPNGYLDLFTQDQSYAKQWRYTNAPDADARAVQVMFWAHEWAEEQGKESEIADLLDKASK
MGDYLRYAMFDKYFKKIGNCVGASSCPAGSGKNSAHYLLSWYYAWGGSLDTSSAWAWRIG
SSSSHQGYQNVLAAYALSQVPELQPASPTGVQDWETSFERQLEFLQWLQSAEGGIAGGAT
NSWQGSYNTPPAGLSQFYGMYYDWQPVWNDPPSNNWFGFQVWNMERVAQLYQVTGDARAE
AILDKWVPWAIAHTDVDAAGGGENFQVPSDLRWSGQPDTWTGTYTGNPNLHVEVVSYSQD
VGVTAALAKTLLYYAERSGDTEALATAEGLLDALLAHRDSIGIATPEQPSWDRLDDPWDG
SEGLYVPPGWSGTMPNGDRIEPGATFLSIRSFYLDDPLWPQVEAHLNNPDSVPAPIVERH
RFWAQVEIATAFAAHDELFGS
Download sequence
Identical sequences A0A147KIK5
WP_068754796.1.71320

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]