SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for WP_078676918.1.5372 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_078676918.1.5372
Domain Number 1 Region: 656-935,975-1060
Classification Level Classification E-value
Superfamily Galactose mutarotase-like 7.01e-32
Family alpha-mannosidase, C-terminal domain 0.014
Further Details:      
 
Domain Number 2 Region: 272-555
Classification Level Classification E-value
Superfamily Glycoside hydrolase/deacetylase 0.0000000000612
Family 4-alpha-glucanotransferase, N-terminal domain 0.039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_078676918.1.5372
Sequence length 1096
Comment glycoside hydrolase [Elizabethkingia endophytica]; AA=GCF_002023625.1; RF=na; TAX=1606016; STAX=1606016; NAME=Elizabethkingia endophytica; strain=CSID_3000517066; AL=Contig; RT=Major
Sequence
MTGNFIHAQKKVPYFGNINAINGYENEISGENIDYFSAFPDHATRALLTRTTDGEKTIEW
ETTKVPQKNSGPYVYFNWLVSHSSGSSGGVRNFDLYINDQKALTLSTYPANQRPTWISKA
ADSTAFVFNQTKMDGLKDSYGIAYLRVPVNKVTPGKPLRLKLVGQAQNSRDWFMTYKFTF
QEKMDANVTPFILKDGKRLITLTTLHFGPEEKIIAKIDNKESFSFTMPDGIKTFDIPVTL
SQTGGNIQLTVTSGKKELLRKTIQAGTIVPRTLYFIHHSHTDVGYSHLQAEVEKIHTKNI
YDALKMIDETRNLPEEARFKWNVEALWDVENFMQKATPEDKKAFVKAVKDGGIGLSAMYG
NILTGLSQPEELFHYTEYAQKLEKEYGFKINSAMMSDVPGFAWSLVPALTTSGVKYFSSG
PNYLGKTNPYLGDRVGNFVKNWGDKPVWWQSPSGKEKILFWTAGRGYSSWHGIHPGAVFE
TGQKKIAEYLDDLTRTNYPYDIVQWRYNIVSDNGPIDPSISKFVDDWNKKYTSPKIVLST
NEKMFEVFEKKYGDKLPVVKGDISPHWEDGAMSTAKEEGINRNSGLKLQQLTTLYSMLNP
RLYNTQSFYDAWRNVILFHEHTWGAFNSITAPDLPFVTDQWKVKRQFSLEGNSITNQLEK
DLLQPLTNPGSKKIEVFNTSSWARSGVVTIPATADGNSVQDAAGNKIPLQKLENGTMVFM
AKNIPALGSAVYTIIKNKTLATTPFVVTNNSISNGKITLTWDNKTGSITHFTDNGTTNYA
GSYNNQGLNSYWYVPGSDPKEAKSNTEVQTKILEKGPVMVKVLLTAEAPGANKLERIITL
YNDSDEALLENIVDKKPVRTKESVHFGFPFNSGFKNITADAGYGIMKYLTDQLPGSNMDY
WYSRRWVDASSGQKGIQWMMIETPLTEAAEMIDERMLIDNSHKKWKDIGTTGTTNWFSYA
MNNYWHTNYKADQEGPVHYRYALRPHDSFNSVENEKYAAAFTQPLIAIPVNEKAEIKGSL
FHMKNDKIVVTSITPQDDQSFIIRLYNPDEKEQTTTFTWERLKPSKLIYNKTGKEISIND
SISLNSMDIIEIKAIP
Download sequence
Identical sequences WP_078676918.1.12785 WP_078676918.1.5372

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]