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Domain assignment for XP_001380139.1.35504 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_001380139.1.35504
Domain Number 1 Region: 228-421
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.86e-43
Family Pentraxin (pentaxin) 0.00068
Further Details:      
 
Weak hits

Sequence:  XP_001380139.1.35504
Domain Number - Region: 121-188
Classification Level Classification E-value
Superfamily Apolipoprotein 0.0889
Family Apolipoprotein 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_001380139.1.35504
Sequence length 431
Comment PREDICTED: neuronal pentraxin-1 isoform X1 [Monodelphis domestica]; AA=GCF_000002295.2; RF=representative genome; TAX=13616; STAX=13616; NAME=Monodelphis domestica; AL=Chromosome; RT=Major
Sequence
MPGGIPWCFVVLFAVCLKCLAQNFGQTRFICTSVPVDMDMCSSVQSSGSAEDLKTNVLQL
RETVLQQKETIMNQKETIRELTTKLGRCESQSLLESGPNEAKPGAGRKQSGSGKNTMGDL
SRTPAAETLSQLGQTLQSLKTRLENLEQYSRLNSSSQTNSLKDMLQSKIDDLEKQVLSRV
NSLEEGKLNPKNETEERVKIESTLTSLHQRISDLEKGQKDNRPGDKFQLTFPLRTNYMYA
KVKKSLPEMYAFTICMWLKSNASPGVGTPFSYAVPGQANELVLIEWGNNPMEILINDKVA
KLPFVINDGKWHHICITWTTRDGVWEAYQDGTQGGNGENLAPYHPIKPQGVLVLGQEQDT
LGGGFDATQAFVGELAHFNIWDRKLTSGEIYNLATCSTKALSGNVIAWAETNIDIYGGAT
KWTFEACRQIN
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Identical sequences F7EZT8
13616.ENSMODP00000002918 ENSMODP00000002918 ENSMODP00000002918 XP_001380139.1.35504

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