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Domain assignment for XP_001380874.1.35504 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_001380874.1.35504
Domain Number 1 Region: 59-257
Classification Level Classification E-value
Superfamily Apolipoprotein A-I 1.83e-45
Family Apolipoprotein A-I 0.00036
Further Details:      
 
Domain Number 2 Region: 207-361
Classification Level Classification E-value
Superfamily Apolipoprotein A-I 2.22e-33
Family Apolipoprotein A-I 0.0026
Further Details:      
 
Weak hits

Sequence:  XP_001380874.1.35504
Domain Number - Region: 25-72
Classification Level Classification E-value
Superfamily Apolipoprotein A-II 0.00484
Family Apolipoprotein A-II 0.0082
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_001380874.1.35504
Sequence length 371
Comment PREDICTED: apolipoprotein A-IV [Monodelphis domestica]; AA=GCF_000002295.2; RF=representative genome; TAX=13616; STAX=13616; NAME=Monodelphis domestica; AL=Chromosome; RT=Major
Sequence
MFLKAVLLSLAFVAIASVQAETQPDQISQIVWDYFNKLSANAKDAMEQLQNSELNQQFNT
LLQDKLGEVSTRTNDLTKKILPFAMELPTRLVQDSERLKTQIQREMEELRVQIQPFAEQV
NQKMTDNVQTLKKHVVPYTSELQTHLSENVEQLQQQLAPFVQQLDEAMKENLKSLQTDII
PLANQFKDKVNQQVDNIKGQLIPYADRIQGKIDEHIEELRKTLTPFATGAQDQLNRQLES
LAFQMKKNVEQLRTKISENTEDLKQKLTPFAEDIQGKIPGNSEELYQSLTKVRGQMNQHI
EEFRRNIGPQGEAFNTALVQHLEELKKKLGSHSGEIEDHLGLLEKGLRDKVNSFFSSLQE
SQEEMPADPKP
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Identical sequences F6TDB8
XP_001380874.1.35504 ENSMODP00000017253 ENSMODP00000017253

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