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Domain assignment for XP_001777066.1.60028 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_001777066.1.60028
Domain Number 1 Region: 247-534
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 3.6e-68
Family Tandem AAA-ATPase domain 0.0003
Further Details:      
 
Domain Number 2 Region: 574-597
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0000733
Family Retrovirus zinc finger-like domains 0.0061
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_001777066.1.60028
Sequence length 616
Comment predicted protein [Physcomitrella patens]; AA=GCF_000002425.3; RF=representative genome; TAX=3218; STAX=3218; NAME=Physcomitrella patens; ecotype=Gransden 2004; AL=Scaffold; RT=Major
Sequence
MAVHEGQLEATEQNGGNQQRGAEEEEEDIEEYVPVKKRRLMAAQQLLNKKAVKGANGANM
TSTLDEQEGLKSSEIKPSLLVKSSQLKKDAPEISVTEALVMQEKEMIERLSEKKHLVPVR
ELAKGISYTEPMQTGWKPPLAIRNLSEKDCKDIRRQWHILVEGDEIPPPIKNFKDMRFPD
PILKKLKAKGITRPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMLALQEEVRM
PLIGGEGPFGLVVCPSRELARQTYDVVEEFTAVLSEKGYPQLRSMLCIGGIDMRSQLEVV
KHGVHIVVATPGRLKDMLAKKKMNLDNCKYLTLDEADRLVDLGFEEDIREVFDHFRGQRQ
TLLFSATMPKKIQNFAKSALVKPVVVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQK
TPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREFAIASFKAGKKDVLVATD
VASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATSFINKNQSETILLDLKH
LLKEAKQRIPPVLATLDDPMEEAEELAKASGVKGCAYCGGLGHRISECPKLEHQKSQAIA
GTRRDYFGSGGYGGEI
Download sequence
Identical sequences A9TEN1
jgi|Phypa1_1|221558|estExt_Genewise1.C_2150004 PP1S215_4V6.1 XP_001777066.1.60028 3218.JGI221558

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