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Domain assignment for XP_001876857.1.58555 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  XP_001876857.1.58555
Domain Number - Region: 571-605
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0351
Family Retrovirus zinc finger-like domains 0.0066
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_001876857.1.58555
Sequence length 626
Comment predicted protein [Laccaria bicolor S238N-H82]; AA=GCF_000143565.1; RF=representative genome; TAX=486041; STAX=29883; NAME=Laccaria bicolor S238N-H82; strain=S238N-H82; AL=Scaffold; RT=Major
Sequence
MSIREAPLLLGRVCSEWRSITLSTPRLWASLHIPAPAPHSLSEYFASILKIEKQCKGTEE
WIRRSGQCPLSISLHTPSPHYRFNMAEMQPFVEVSKWILPSTKRWKNFSFKAPTDSSPHF
QKIAEGDVPMLEALGITIVPRTIYISGLLSAPKLRKLSLTRFRDNLLSLPVHWSQLTHLT
LDAEGSSKQFLGMPSPLTYREVSKVLKNCSLLSMSGTRLKPKSQAAPPQKGKVTTTRQNR
PADTEVQERGKTRATGSVETDEYEHEIGDSDKGRSFLEGRLLMVPAGALLTLGALATTLF
QIAAMPGVALPVVNAVCTVAFLLRDVELEVVAEDIRDIAIAQYNELTNDLKDFTEGLRVK
VMEELEKKTEVLKEKTVELAEVVEKVAQQGHVDKDGLWSPNGCQSLSSCKGEHQAMTISN
RPTQGIKPQQLRQSGSGGLALKLQNGGILVEMVTDDGAAWLASKANAEAFLQELGEKEAS
FKTRSFNVIAYYVPLNLDDNSEKDRGEIEEMNNIPKGTLTKLRWIKPPARRRPDQCFAHV
IATFSDAESANRAIVNGLSICHKRVSVVKCKKEPIRCLKCQGWDHVALECVIAKEVNVCG
TCGGDHWTRQTLTQAGTAAVRPSSGK
Download sequence
Identical sequences B0CZC0
XP_001876857.1.58555 29883.JGI323169 jgi|Lacbi1|323169|fgenesh3_pg.C_scaffold_4000072

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