SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for XP_002283785.1.54126 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_002283785.1.54126
Domain Number 1 Region: 108-163
Classification Level Classification E-value
Superfamily Homeodomain-like 1.35e-16
Family Myb/SANT domain 0.054
Further Details:      
 
Weak hits

Sequence:  XP_002283785.1.54126
Domain Number - Region: 3-23
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00314
Family Retrovirus zinc finger-like domains 0.0064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_002283785.1.54126
Sequence length 358
Comment PREDICTED: uncharacterized protein LOC100241227 [Vitis vinifera]; AA=GCF_000003745.3; RF=representative genome; TAX=29760; STAX=29760; NAME=Vitis vinifera; cultivar=PN40024; AL=Chromosome; RT=Minor
Sequence
MTRRCSHCSTNGHNSRTCPSRGGGAVAGGIGGVKLFGVRLTDGSIIKKSASMGSLSSAHY
HSSSSAAASPNPSSPSSDPLRDAIHEPDGYLSDDPGQATCSSNRRGERKKGVPWTEEEHR
LFLFGLQRLGKGDWRGISRNYVISRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMVPDM
VTDTPPVPEEQFLVPTSQTGETDNASSVPSLNLSLNMEFEPMETISQETVKEAEEAEETV
IPRSELPPVVPAFFPGYLPVPFPFWPPNAASAEEEKESESSHQVLKPIPVLPKEPVNVDE
LVGMSQLSLGEINNGHIDSSPLSLKLLGAPSRQSAFHTNTSVGGSELGKGKNSVVQAV
Download sequence
Identical sequences D7U0C1
XP_002283785.1.54126 GSVIVT01016996001 29760.GSVIVG00034313001

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