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Domain assignment for XP_002941689.1.99540 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_002941689.1.99540
Domain Number 1 Region: 22-281
Classification Level Classification E-value
Superfamily YWTD domain 1.44e-56
Family YWTD domain 0.00000183
Further Details:      
 
Domain Number 2 Region: 633-888
Classification Level Classification E-value
Superfamily YWTD domain 3.01e-54
Family YWTD domain 0.00000478
Further Details:      
 
Domain Number 3 Region: 332-562
Classification Level Classification E-value
Superfamily YWTD domain 1.7e-50
Family YWTD domain 0.00000192
Further Details:      
 
Domain Number 4 Region: 935-1194
Classification Level Classification E-value
Superfamily YWTD domain 4.19e-38
Family YWTD domain 0.0000643
Further Details:      
 
Domain Number 5 Region: 1325-1360
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000196
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 6 Region: 1246-1286
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000327
Family LDL receptor-like module 0.00094
Further Details:      
 
Domain Number 7 Region: 1287-1323
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000327
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 8 Region: 589-634
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000351
Family EGF-type module 0.0078
Further Details:      
 
Domain Number 9 Region: 891-938
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000073
Family EGF-type module 0.023
Further Details:      
 
Domain Number 10 Region: 286-335
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000766
Family EGF-type module 0.011
Further Details:      
 
Domain Number 11 Region: 1204-1256
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000419
Family EGF-type module 0.018
Further Details:      
 
Weak hits

Sequence:  XP_002941689.1.99540
Domain Number - Region: 1435-1477
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 0.0462
Family Prokaryotic proteases 0.04
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_002941689.1.99540
Sequence length 1603
Comment PREDICTED: low-density lipoprotein receptor-related protein 5 isoform X1 [Xenopus tropicalis]; AA=GCF_000004195.3; RF=representative genome; TAX=8364; STAX=8364; NAME=Xenopus tropicalis; strain=Nigerian; AL=Chromosome; RT=Major
Sequence
mgilpgvsllfcyclasswgsplllfanrrdvrlvdaggtklesvvvvsgledaaavdfl
ysqgviywtdvseesikqtlynqssnlqtvvisglvspdglacdwigkklywtdsetnri
evgnlngtyrkvlfwqdldqpraialdpahgymywtdwgdtprieragmdgsmrkvivdt
diywpngltidldeqklywadaklsfihranldgsfrqkvvegslthpfaltlagdtlyw
tdwqtrsihacnkrtgekrreilsslyspmdiqvfskerqpyfptpcdesnggcshlcll
sprepfysctcptgvqltqdgktcktgaddvlllarrtdlrrisldmpdftdivlqiddi
rhaiaidydpvegyiywtddevkairrayldgsgaqtlvttevqhpdgiavdwvarnlyw
tdtgtdrievtrlngtsrkilisenldepraivlhpltgymywtdwgenpkiesayldgs
ermvlvnsslgwpnglaldlqdgklywgdaktdkievinvdgsnrktlledklphifgft
llgdyiywtdwqrrsiervhkvrasreiiidqlpdlmglkaasvsntfgtnpcadnnggc
shlcffsprgvrcscpiglellsdmrtciipeaflvftsratihrisletnnndvaiplt
gvkeasaldfdvsdnrlywtditlktisrafmngssvehviefgldypegmavdwmgknl
ywsdtgtnrievsrldglyrqvlvwkdldnprslaldpakgymywtewggkprivraymd
gtnsiilvdkvgrandltidyadqrlywtdldtnmiessnmlgaerviiaddlphpfglt
qysdyiywtdwnlhsieradklngnnrtliqdhldfvmdilvfhssrqdglndcmqnngh
csqlclavpkgykcscsshytldsnnrncsppsnfllfsqktainrmlldeqqspditlp
ihglrnvkavsydpldkliywvdgrqniikrakddgtqpfvvvstpnqsqtpekqphdls
idiyshtlywtcegtntinanklngesigvvlrgdhdkpraiavnaergylyftnmqers
pkieraafdgterevlfstglirpvalvvdnklgklfwvdadlkriessdlsganrvtle
dsnilqpmgltilgdhlywidkqqqmiervektngirrtkiqgriahptgihavesvdmn
efsahpcsrnnggcshicitkgdgtprcscpvhlvllqnlltcgepptcspeqftcatgd
idcipmawrcdgfsecddnsdeencpvcssnqfqcekgqcidarqkcngeidcqdksdel
dcdsiclpdqfrcangqcimmsqqcdtfpdcsdssdelicdkppsektpshssaigpvig
iilsvfvmgglyfvcqrvvchrytgpngpfpheyisgtphvplnfittrssqpntytgis
ygkpmigsmsimggssgaplydrnhvtgassssssstkatlypqilnpppspatdrslyn
tevfyssnspsttrsyrpylirgiappttpcstdvcdsdyttsrwkankyymdlnsdsdp
ypppptprsqymsaeescppspttersyfhlyppppspctdss
Download sequence
Identical sequences XP_002941689.1.99540 gi|301624799|gb|XP_002941689|

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