SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for XP_002962205.1.77236 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  XP_002962205.1.77236
Domain Number - Region: 319-353
Classification Level Classification E-value
Superfamily Rho N-terminal domain-like 0.000239
Family Rho termination factor, N-terminal domain 0.033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_002962205.1.77236
Sequence length 359
Comment hypothetical protein SELMODRAFT_403819 [Selaginella moellendorffii]; AA=GCF_000143415.3; RF=representative genome; TAX=88036; STAX=88036; NAME=Selaginella moellendorffii; AL=Scaffold; RT=Major
Sequence
MYLARSVASSNDAHRPQFPHSSMLGGPVSSLLGNGGGDGHCRAHLSLEILASRRKQGDGC
SAVTRPASLFVKRSPVPARRPLGYIPLSSISNNNPEGDEEEEEEEEEEEDLLEKEEIDGG
RLAKAKKPEPVQVRKKSDRVSKWASLFEAANGSSSSSTATAETNNNTDAWFDKIFPKNPA
GGASSPPSSSKLSAQQEKSIQQLQSLVKTLGVATKNPPPPARKNKPSKIRQLPVEGGGVV
DPVPFASILKKLQSVSSPKPEQRSRLGQELERSTKVVEELGSEEEGSETSESGGSTARIE
EESSEEEGVFSRKSAVEEINDLAKLTVPTLRGMAKSRGLSGYSRLKKDDLVHLLTSSDK
Download sequence
Identical sequences D8QSM7
XP_002962205.1.77236 jgi|Selmo1|403819|fgenesh2_pg.C_scaffold_1000656

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]