SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for XP_003451515.1.78416 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_003451515.1.78416
Domain Number 1 Region: 139-421
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.36e-102
Family RecA protein-like (ATPase-domain) 0.000000000129
Further Details:      
 
Domain Number 2 Region: 424-551
Classification Level Classification E-value
Superfamily C-terminal domain of alpha and beta subunits of F1 ATP synthase 3.14e-45
Family C-terminal domain of alpha and beta subunits of F1 ATP synthase 0.00000078
Further Details:      
 
Domain Number 3 Region: 53-137
Classification Level Classification E-value
Superfamily N-terminal domain of alpha and beta subunits of F1 ATP synthase 2.62e-27
Family N-terminal domain of alpha and beta subunits of F1 ATP synthase 0.00000674
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_003451515.1.78416
Sequence length 552
Comment PREDICTED: ATP synthase subunit alpha, mitochondrial isoform X1 [Oreochromis niloticus]; AA=GCF_001858045.1; RF=representative genome; TAX=8128; STAX=8128; NAME=Oreochromis niloticus; AL=Chromosome; RT=Major
Sequence
MLSVRVAAALARNLPRRAGLVSKNVAAACVGAKNLHTSSPWLQKKTGTAEVSSILEEKIM
GADTSSDLEETGRVLSIGDGIARVYGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFG
NDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPLGSKVRRRVGLKAPGII
PRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDGTDEKK
KLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF
RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDNFG
GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA
AQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYSPMA
IEEQVAVIYAGVRGHLDKMEPSKITKFEKAFLQHILSQHQDLLANIKADGKISEASDAKL
KQIVLNFLSSFE
Download sequence
Identical sequences I3JKV4
ENSONIP00000009498 ENSONIP00000009498 XP_003451515.1.78416

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]