SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for XP_003499365.1.69978 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_003499365.1.69978
Domain Number 1 Region: 29-279
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 4.11e-93
Family Calponin-homology domain, CH-domain 0.00000302
Further Details:      
 
Domain Number 2 Region: 295-416
Classification Level Classification E-value
Superfamily Spectrin repeat 2.09e-33
Family Spectrin repeat 0.0000925
Further Details:      
 
Domain Number 3 Region: 2173-2292
Classification Level Classification E-value
Superfamily PH domain-like 1.65e-32
Family Pleckstrin-homology domain (PH domain) 0.0000205
Further Details:      
 
Domain Number 4 Region: 1640-1793
Classification Level Classification E-value
Superfamily Spectrin repeat 7.2e-30
Family Spectrin repeat 0.001
Further Details:      
 
Domain Number 5 Region: 1009-1164
Classification Level Classification E-value
Superfamily Spectrin repeat 1.24e-29
Family Spectrin repeat 0.00000434
Further Details:      
 
Domain Number 6 Region: 1532-1686
Classification Level Classification E-value
Superfamily Spectrin repeat 7.86e-29
Family Spectrin repeat 0.0029
Further Details:      
 
Domain Number 7 Region: 601-740
Classification Level Classification E-value
Superfamily Spectrin repeat 2.1e-28
Family Spectrin repeat 0.00032
Further Details:      
 
Domain Number 8 Region: 1851-2005
Classification Level Classification E-value
Superfamily Spectrin repeat 1.64e-27
Family Spectrin repeat 0.0019
Further Details:      
 
Domain Number 9 Region: 815-950
Classification Level Classification E-value
Superfamily Spectrin repeat 2.44e-24
Family Spectrin repeat 0.0028
Further Details:      
 
Domain Number 10 Region: 1229-1375
Classification Level Classification E-value
Superfamily Spectrin repeat 4.18e-24
Family Spectrin repeat 0.00091
Further Details:      
 
Domain Number 11 Region: 425-528
Classification Level Classification E-value
Superfamily Spectrin repeat 3.4e-22
Family Spectrin repeat 0.00036
Further Details:      
 
Domain Number 12 Region: 745-849
Classification Level Classification E-value
Superfamily Spectrin repeat 5.44e-19
Family Spectrin repeat 0.0014
Further Details:      
 
Domain Number 13 Region: 528-636
Classification Level Classification E-value
Superfamily Spectrin repeat 3.02e-17
Family Spectrin repeat 0.00074
Further Details:      
 
Domain Number 14 Region: 2011-2070
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000000158
Family Spectrin repeat 0.0016
Further Details:      
 
Domain Number 15 Region: 1386-1477
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000000406
Family Spectrin repeat 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_003499365.1.69978
Sequence length 2329
Comment PREDICTED: spectrin beta chain, erythrocytic isoform X1 [Cricetulus griseus]; AA=GCF_000223135.1; RF=representative genome; TAX=10029; STAX=10029; NAME=Cricetulus griseus; AL=Scaffold; RT=Major
Sequence
MTSATEFENVGNQPPYSRINARWDVPDDELDNDNSSARLFERSRIKALADEREVVQKKTF
TKWVNSHLARVSCRISDLYKDLRDGRMLIKLLEVLSGEMLPRPTKGKMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIVVQTQEGRETRSAKDALL
LWCQMKTAGYPHVNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKLKDSNARHNLEHAFDV
AERQLGIIPLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKVLAVEGKRVGKVIDHAIET
EKMIEKYSGLASDLLTWIEQTINVLNSRKFANSLSGVQQQLQAFSTYRTVEKPPKFQEKG
NLEVLLFTIQSRMRANNQKVYTPHDGKLVSDINRAWESLEEAEYQRELALRSELIRQEKL
EQLARRFDRKAAMRETWLNENQRLVTQDNFGYDLAAVEAAKKKHEAIETDTAAYEERVKA
LEDLAQELEKENYHDQKRIMARKDNILRLWSYLQELLRSRRQRLEATLELQKLFQDMLHS
IDWTDEMKAHILSAEFGKHLLEVEDLLQKHRLMEADIAIQGDKVKAITAATLQFTEGKGY
QPCDPQVIQDRISHLEQCFSELSNMAAGRKAQLEQSKRLWKFFWEMDEAESWIKEKEQIY
SSLDYGKDLTSVLILQRKHKAFEDELRGLDAHLKQIFQEAEGMVAQKQFGHPQIENRVKE
VSAQWDHLKELADFRKKDLQNAENFFQFQGDADDLKAWLQDAHRLLSGEDVGQDEGATRA
LGKKHKEFLEELEESRGLMEHLEHQAQGFPEEFRDSPDVTNRLQTLRKLYQQVLAQAELR
GQRLQDALDLYTVFGESDACELWMSEKEKWLNQMDIPNTLEDLEVVQHRFDILDQEMKTL
MAQIDGVNLAANNLVESGHPRSGEVKQCQDRLNKRWQAFQAVVSEQRKAVDSALRVNNYC
VDCEETSKWIIDKTKVVKSTKDLGQDLAGVIAIQRKLSGLERDKLAIRDRVSALQRESQY
LMESHPEQKEDIGRRQADVEKLWKGLQDALQDQELSLGEASKLQAFLQELDDFQAWLSMA
QKAVASEDMPESLPEAEQLLQQHAAIKEEIDAHQDNYHQVKASGEKVIKGQKDPEYQFLG
QRLKGLDTGWDALRRMWESRGHSLTQCLGFQEFQKDAKQAEAILSNQEYTLAHLEPPDSL
AAAEAGIRKFEDFLVSMENNRYKVLSPVDSGNKLVDEGNLYSDKIKEKVQLIEDRHKKNN
EKAQEATVLLKDNLELQNFLQNCKELTLWINDKLLTSPDVSYDEARNLHNKWMKHQAFMA
ELASHQGWLENIDAEGRQLMVEKPQFKDVVSERLDALHKLWDELQTTTKAKTEQLSAARS
SDLRLQTHADLNKWIGAMEDQLRSDDLGKDLTTVNRMLAKLKRVEDQVNLRKEELEELFA
EAPSLGAEAGDTDMSIEKRFLDLLEPLGRRKKQLELSKAKLQISRDLEDETFWVEERLPL
AQSADYGTNLQTVQLFMKKNQTLQNEILGHAPRVEDVLQRGQQLVKAAEIDCQDIEERLG
HLQGSWDTLREAATGRLQRLRDAHEAQQYYLDAGEAEAWIGEQELYVFSDEPPKDEEGAI
VMLKRHLRQQRTVEEYGRNIKQLAGRAQSLLSAGHPEGEQIIRLQGQVDKQYAGLKDMAE
ERRRKLENMYHLFQLKREADDLEQWITEKEMVASSQEMGQDFDHVTMLRDKFRDFARETG
AIGQERVDNVNTIIERLIDAGHSEAATIAEWKDGLNDMWADLLELIDTRMQLLAASYDLH
RYFYTGTEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVAT
RLQTAYAGEKADAIQSKEQEVSAAWQALLDACAGRRAQLVDTADKFRFFSMVRDLLSWME
SIIRQIETQERPRDVSSVELLLKYHQGIKAEINTRAKNFSTCLELGESLLQRQHQASEEI
REKLQQVMSRRQEMNDKWEARSDRLHMLLEVCQFSRDASVAEAWLIAQEPYLASRDFGHT
VDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELKERQTPDRPVEEPGPQEEEGETAG
EAPQVHRAATERTSPGEERGTWPEDLQPPPLPEHHKDEQEKSVGDERPATEPLFKVLDTP
LSEGDEPTTLPAQRDLGHTVQMEGYLGRKHDLEGPNKKASNRSWNNLYCVLRNSQLTFYK
DAKNLALGVPYHGEEPLALRHAICEIAANYKKRKHVFKLRLSNGSEWLFHGKDEEEMLWW
LQGMSTAINESQSIRVKAQSLPLPSLAGPDASLGKKDKEKRFSFFPKKK
Download sequence
Identical sequences XP_003499365.1.69978

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]