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Domain assignment for XP_003543460.1.40590 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003543460.1.40590
Domain Number 1 Region: 1-64
Classification Level Classification E-value
Superfamily SAP domain 2.14e-17
Family SAP domain 0.0043
Further Details:      
 
Domain Number 2 Region: 107-169
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.00000000000219
Family PHD domain 0.0002
Further Details:      
 
Weak hits

Sequence:  XP_003543460.1.40590
Domain Number - Region: 376-407
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0419
Family PHD domain 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_003543460.1.40590
Sequence length 880
Comment PREDICTED: E3 SUMO-protein ligase SIZ1-like isoform X1 [Glycine max]; AA=GCF_000004515.4; RF=representative genome; TAX=3847; STAX=3847; NAME=Glycine max; cultivar=Williams 82; AL=Chromosome; RT=Major
Sequence
MDLVASCKEKLQHFRIKELKDVLTHLGLSKQGKKQDLVDRILAILSEDQVSKLWTKKNAV
GKQEVAKLVDDTFRKLQVSGAIDLASKGQGASDSSNVKIKGEIDDSYQSDTKIRCLCGNV
FDTEPLVKCEDTRCHASQHISCVIIPEKPMDGIPPIPDKFYCEICRLDRADPFCISVTHL
LFPVKLTTTNIPTDGSNPVQSVERMFQLSRANKELVSKSEYDVQVWCMLLNDKVSFRMQW
PQFADLKVNGLPVRAINRPGSQLLGANGRDTGPVITPYTKDGINKISLTGCDARIFCVGV
RIVKRLSMPEVLSMIPEESNGEHFEDALARVCCCVGGGNANDNADSDSDLEVVSDTFSIN
LRCPMSGSRMKIAGRFKPCVHMGCFDLEVFVEMNERSRKWQCPICLKNYALENIIIDPYF
NRITTLMKNCGEEIAEVEVKPDGCWRVKAKNESERRELGTLAQWHRPDGSLFVSTDEVKS
MENIKLKQEGVSDSPIGVLKLGIRKNSNGVWEVSKPENTNTSSGNNRLNEDLENHEHVII
PMSSSDTGSGRDEDDPSVNQGGGEHIDYSTTNGIEMDSVFNNNIDSAYGYNVNNASALMG
DAQVIILSDSEEDNDVLMSHTRITGYKNNQTSDAVDVYSVLQPGIIDPYREDHNPGVFNN
PSEDDFGMPSLWPLQSGTPAVPGFQLFSSEVEDDVSDALIDLHHGNINCSSSLNGYTLAP
DTLGSGTLIPDSSAGRPDDDLNGGLVDNPLAFPREDPSLQIFLPTKPAESSMQHELRDHA
DGSNGVFTEDWISLSLGGGASGSNGDTSSANELNLRPQITPREDARDSLTDAAPLLLGVN
DVRPDKASRQRSDSPFSFPRQKRSKLKKVEQHFWSSGNGR
Download sequence
Identical sequences K7M382
XP_003543460.1.40590

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