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Domain assignment for XP_003558846.1.954 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003558846.1.954
Domain Number 1 Region: 223-519
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.12e-62
Family WD40-repeat 0.0003
Further Details:      
 
Domain Number 2 Region: 1-53
Classification Level Classification E-value
Superfamily RING/U-box 0.000000000000618
Family U-box 0.0024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_003558846.1.954
Sequence length 527
Comment PREDICTED: pre-mRNA-processing factor 19-like [Brachypodium distachyon]; AA=GCF_000005505.2; RF=representative genome; TAX=15368; STAX=15368; NAME=Brachypodium distachyon; strain=Bd21; AL=Chromosome; RT=Major
Sequence
MICAISGEVPEEPVVSKNSGLLFERRLIERYIEDHGKCPVTKDELAMDDLVAVKTNKITK
PRPLQAASVPGLLGMFQNEWDALMLSNFALEQQLHTSRQELSHALYQHDAACRVIARLKK
ERDESRTLLAQAERQIPISAAGAAPVAVVTNGKIALDDEVGPDGKKMRPGINPVMIDELT
ECNSMLSAQRKKRQVPPSLASIDALERYTQVSSHPLHKTNKPGILSIDIHHSKDIIATGG
IDTNAVLFDRPSGQVLCTLTGHSKKITSLKFVPWDELLITGSADKTVRIWQGSEDGNYGC
RHTLKDHNAEVQAVTVHATQKYFVTASRDNTWCFYDISTGSCLTQVGEASGQDGYTAAAF
HPDGLILGTGTSEAVVKIWDVKTQSNVAKFDGHVGAVTAMSFSENGYFLATAAVDGVKLW
DLRKLRNFRTISPYDPDTPTSSVEFDSSGSYLAVAGSDIRVYQVANVKMEWNLVKTLPDL
SGTGKVTSVKFGTDAKYVAVGSMDRNLRIFGLPGDEQMEEAKSPVSE
Download sequence
Identical sequences I1H9X7
15368.BRADI1G75750.1 EG:BRADI1G75750.1 XP_003558846.1.954

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