SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for XP_004253847.1.21224 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  XP_004253847.1.21224
Domain Number - Region: 19-86
Classification Level Classification E-value
Superfamily Myosin rod fragments 0.000275
Family Myosin rod fragments 0.0071
Further Details:      
 
Domain Number - Region: 115-349
Classification Level Classification E-value
Superfamily Tropomyosin 0.00229
Family Tropomyosin 0.0021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_004253847.1.21224
Sequence length 356
Comment M protein, serotype 12 precursor, putative [Entamoeba invadens IP1]; AA=GCF_000330505.1; RF=representative genome; TAX=370355; STAX=33085; NAME=Entamoeba invadens IP1; strain=IP1; AL=Scaffold; RT=Major
Sequence
MKSQEDQKHIEELRKDSVITELNKDIEDKEGEISDLKKKLEAEEDNPKDLETQLHEKEDD
IADLEKQVKKLQNTISDVNAQNEDIDSKVSDERDGYNQQLQAEKTKTAALTSAKNASDKK
ISLLNSEKDELEDKNRKIAELTKRIEDGLNDSDMLKAQKADYEAQIQALKDDMEKTEKYL
AAALNEEVEAANEKLRITKNDLGRTKAELDQLQQNFDYLKKNADTDTVDKKKLNGTVNKS
NKKIEELSVKVDELTGVITKIEQEVVEANEELETVNKDKFAKEKEAKRLKAKTTKLKRRR
NIADLEQQVQDFEDKVGTSNIDQTEVIKRHNQIVDLENEVAVLKDQNTQLDAAKKI
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Identical sequences L7FKV8
jCVI|EIN_018450 XP_004253847.1.21224

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