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Domain assignment for XP_004297494.1.20112 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004297494.1.20112
Domain Number 1 Region: 163-296
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.83e-40
Family B3 DNA binding domain 0.0035
Further Details:      
 
Domain Number 2 Region: 725-804
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.0000000000172
Family PB1 domain 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_004297494.1.20112
Sequence length 843
Comment PREDICTED: auxin response factor 2 [Fragaria vesca subsp. vesca]; AA=GCF_000184155.1; RF=representative genome; TAX=101020; STAX=57918; NAME=Fragaria vesca subsp. vesca; AL=Chromosome; RT=Major
Sequence
MTSSEVSIKDNGGNQRGGGGGGERESFSSSFSDHNDGRNAGEGQNGHSAVPAAGRDAETA
LYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVYDLPPKILCRVI
NVQLKAEPDTDEVFAQVTLLPEPNQDESAVEKITPPLPPPRFQVHSFCKTLTASDTSTHG
GFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV
SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIKTG
TMFTVYYKPRTSPAEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIIGIED
ADPARWRESKWRSLKVRWDENSTIPRPERVSCWKIEPALAPPALNPLPMPRPKRPRPNMV
PSSPDSSVLTREGSLKVTVDPVLQGGGYSRVLQGQEFSTLRGNFVESESDTAQKSTARPA
TIDDNSISGSKRYGSGTDNWMPSGRHEPTYTDLLSGFGTNSDSHGICQPFVDQAVASSNS
MRKHSLDQEGKFNLSSWSMLPSSLSLSLDSNLKGPIVNASYQAQQNVRYGGLNDYSVHHG
QRVEQTQGNWLMPPPPPPPSHFDQANVREVMPKHISLLKHEAVKPKDISCKLFGIPLITH
EPSTNRTAMNESAYHNQALTLESDQKLEVSRGLKSVDNLSAVNESDKQISQQHTRDGQGK
AQGSSTRSCTKVQKQGIALGRSVDLTKFHNYDELIAELDQLFEFNGELMDPKKNWLLVYT
DDENDMMLVGDDPWQEFCGIVRKIFIYTREEVQKMNPGTLTSLGEENPALPAEGVDAREG
KSQ
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Identical sequences XP_004297494.1.20112

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