SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_004659191.1.11716 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_004659191.1.11716
Domain Number 1 Region: 113-180
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000000000419
Family VWC domain 0.038
Further Details:      
 
Domain Number 2 Region: 257-324
Classification Level Classification E-value
Superfamily FnI-like domain 0.00000000000471
Family VWC domain 0.0087
Further Details:      
 
Domain Number 3 Region: 35-101
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000000129
Family VWC domain 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_004659191.1.11716
Sequence length 456
Comment PREDICTED: chordin-like protein 1 isoform X4 [Jaculus jaculus]; AA=GCF_000280705.1; RF=representative genome; TAX=51337; STAX=51337; NAME=Jaculus jaculus; AL=Scaffold; RT=Major
Sequence
MRKKWKMGDMKYIFPLLFFLFLEGSETEQVKHSETYCVFQDKKYRVGEKWHPYLEPYGLV
YCVNCICSENGNVLCSRVRCPSLHCLSPVHIPHLCCPRCPDSLPPVNNKVTSKSCEYNGT
TYQHGELFMAEGLFQNRQPNQCTQCSCSEGNVYCGLKTCPKLTCAFPVSVPDSCCRVCRG
DGELSWEHSDGDIFRQPANREARHSYPRSHYDPPPSRQAGGLPRFPGARSHWGALLDSQQ
ASGTIVQIVINNKHKHGQVCVSNGKTYSHGESWHPNLRAFGIVECVLCTCNVTKQECKKI
HCPNRYPCKYPQKIDGKCCKVCPGKKAKELPSQNFDSKGYFCGEETMPVYESVFMEDGET
TRKIALETERPPQVEVHVWTIRKGILQHFHIEKISKRMFEEFHHFKLVTRTTLSQWKIFT
EGEAQISQMCSNRVCRTELEDLVKVLYLERSEKGHC
Download sequence
Identical sequences XP_004659191.1.11716

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]